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Name : ccmF (GNIT_2494) Accession : YP_004872584.1 Strain : Glaciecola nitratireducens FR1064 Genome accession: NC_016041 Putative virulence/resistance : Unknown Product : cytochrome c biogenesis factor Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 2745465 - 2747489 bp Length : 2025 bp Strand : - Note : - DNA sequence : ATGATCCCAGAGTTAGGAAACATTGCGCTTATTATTGCGCTAGCACTGTCTATTCTGCTTGCTGTGTATCCGCTTTGGGG CGCACAAATCCACAATCAAACTATGATGAGAATGGGCCGTCCTCTTAGTTTCGGTTTGTTCTTATTTACCGCATTTGCCT ACGGTTGCTTAACCTACTCATTCGCGGTCGACGACTTTAGTGTGCAATATGTGGCACAAAACTCAAACAGTGCGCTGCCT ATTTATTACAAGATAACGGCAGTGTGGGGCGGACATGAGGGTAGTTTCCTTTTGTGGTGTCTAATTTTTGCTGTGTGGAC CTGCGCCGTGGCTGCATTTTCGAAAGGTATTCCGCAGGCAATGATTGCTCGTGTGCTGTCAGTATTAGGGATGGTTAGCA TTGGTTTCTATTTGTTCATGTTGCTAACATCAAACCCGTTCGACAGCTTATTACCATTTTTCCCGGTAGATGGGCGAGAT TTGAACCCACTGCTGCAAGATTTCGGCATGATTATTCACCCGCCTATGCTGTATATGGGCTACGTTGGTTTCTCCGTTGC GTTTGCGTTTGCTATTGCCGCGCTAATTGGTGGTCAACTGGATTCAACTTGGGCGCGCTGGTCGCGTCCGTGGACTATCG CTGCGTGGAGTTTCCTCACAGTGGGCATCGCATTGGGCAGTTGGTGGGCTTACTACGAACTCGGTTGGGGCGGCTGGTGG TTCTGGGATCCTGTCGAGAACGCATCGTTTATGCCTTGGTTGGTCGGCACCGCGTTAATGCACAGCTTAGCGGTCACTGA AAAACGTAAAGTGTTTAAGTCTTGGACTGTTCTCTTAGCTATCGCAGCATTTTCATTGAGCTTACTGGGTACATTCTTAG TTCGTTCGGGTGTACTGGTTTCAGTGCATTCCTTTGCCAGCGATCCATCTCGTGGTCTGTTCATCTTAGGCTTACTCGTG GTGGTTATCGGTGGCTCACTCTTGCTTTATGCATTACGTGCTTCGCAGTTAAAAAGCGTTGGGCGTTATGAAATGTTCTC TCGCGAAATGATGCTAATGGGCAATAACGTGCTGCTAGTAGCAGCGACCATCGTCGTTCTGCTAGGAACGTTGTTACCTT TAGTCCATAAGGAAATCGGCTTAGGTACGATATCGATTGGTGCACCTTTCTTTAATGAAATGTTTACCTTGCTGATTGTG CCTTTCGTTCTGTTCATGGCTGTTGGCCCGCTATCACGATGGAAAAAGCAGGCGCCCGCAGCACTGAGAAATCAGTTGGT GTTTGGAATGATTTTGGCGCTATCCGCAGGATTGTTGATTAACTTCACGTATGACGAGCCTACCTACATGGGCATGCTCG GCATGGTGATGAGTTTCTGGATATTAATCGCGATTATCTTAGAAGTGCGTCAGCGCGTTGTATCTAACACAAGATCAGAG CCTGTGTTGGCATCGTTGCGAAAGCTAACGCCAAGTCACTGGGGCATGGTCTTAGGTCACGTCGGTTTTGCGGTTACGCT CATTGGTATCACCTTAGTCAGTAACTACGAATTAGAGCGTGATGTGCGCATGAACGCAGGAGATACCGTCAAAATTGCAG ATTATACGGTTTCTTTTACCGGCGTTAAGCAAATTGAAGGACCCAACTACAGCGCCGATCGCGGTGTTTTTGACGTATAC AAAAACGGCGAATTCGTAAATCACCTCGAGCCAGAAAAACGCTTCTACCCAGTTCAGCGCACATCAATGACTGAAGCCGG AATACACACAACATTAACCCGCGACTTGTTCGTTGCCTTGGGTGAACCGCTATCAAACGACGCGTGGGCCATCCGACTCT ACTACAAGCCTTTCGTAGTATGGATTTGGGGCGGCGCCATAATCATGTGCATCGGCGGCATCTTCTCAATCAGCGACAAA CGCTACCGCATCAAGAAAATGGCCAAGTGGCGCAACGTACCCAGCGAATCAAAAACCAAGGGGCCAGAGACCTTGAAACC CAAGCTATCAAGGGGCCAGGTTTGA Protein sequence : MIPELGNIALIIALALSILLAVYPLWGAQIHNQTMMRMGRPLSFGLFLFTAFAYGCLTYSFAVDDFSVQYVAQNSNSALP IYYKITAVWGGHEGSFLLWCLIFAVWTCAVAAFSKGIPQAMIARVLSVLGMVSIGFYLFMLLTSNPFDSLLPFFPVDGRD LNPLLQDFGMIIHPPMLYMGYVGFSVAFAFAIAALIGGQLDSTWARWSRPWTIAAWSFLTVGIALGSWWAYYELGWGGWW FWDPVENASFMPWLVGTALMHSLAVTEKRKVFKSWTVLLAIAAFSLSLLGTFLVRSGVLVSVHSFASDPSRGLFILGLLV VVIGGSLLLYALRASQLKSVGRYEMFSREMMLMGNNVLLVAATIVVLLGTLLPLVHKEIGLGTISIGAPFFNEMFTLLIV PFVLFMAVGPLSRWKKQAPAALRNQLVFGMILALSAGLLINFTYDEPTYMGMLGMVMSFWILIAIILEVRQRVVSNTRSE PVLASLRKLTPSHWGMVLGHVGFAVTLIGITLVSNYELERDVRMNAGDTVKIADYTVSFTGVKQIEGPNYSADRGVFDVY KNGEFVNHLEPEKRFYPVQRTSMTEAGIHTTLTRDLFVALGEPLSNDAWAIRLYYKPFVVWIWGGAIIMCIGGIFSISDK RYRIKKMAKWRNVPSESKTKGPETLKPKLSRGQV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 3e-137 | 56 |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 1e-134 | 55 |
