Gene Information

Name : OBV_21100 (OBV_21100)
Accession : YP_004881814.1
Strain : Oscillibacter valericigenes Sjm18-20
Genome accession: NC_016048
Putative virulence/resistance : Resistance
Product : putative drug efflux ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2002782 - 2003489 bp
Length : 708 bp
Strand : +
Note : -

DNA sequence : 
ATGGTAAGGCCCATGTTAATCGAATTAAAGGATATCTATAAGATCTATGGCGAGGGGCTGGAGAGCGAGGTCCGGGCGCT
GGACGGCATCTCACTGAATATTGACCGGGGAGAGTTTGTGGCCATCGTGGGACAGTCTGGATCAGGAAAGTCCACCATGA
TGAACGTGCTGGGCTGTCTGGATATCCCCACCCGGGGGGACTATCTGCTGGACGGGGTGAACGTGAAAGAGCTGAGTGAC
AAGGAGCTGAGCCACATCCGCAACAAGCAGATCGGCTTCATCTTCCAGCAGTACAATCTGGTACAGAATCTGAACGTTCT
TGAAAATGTGGAGCTTCCCCTGATCTATCAGGGCATCGGCGTGGAAAAACGCCGGGAGCTTGCTATGGAGGCGCTGGAAA
GGGTGGGCCTTGAAAACCGCGTCAAGCACAAGCCGACGGAGATGTCCGGCGGACAGCAGCAGCGGGTGGCCATTGCCCGG
GCAATCTCCACCAAACCGCCCATCGTCATGGCCGACGAGCCCACTGGCGCATTGGACTCTCATACCGGTCACGATGTGCT
GAAATTTCTTCAGCAACTGAACAAGGATGGCAGCACCGTGATTCTCATCACTCACGACAACGGCATTGCCGCTACCGCCC
GCCGGGTGGTGCGGCTGGCTGATGGGAAGAAGATCGAAGACCATCCCCAGGAGGTGGATTGGCTATGA

Protein sequence : 
MVRPMLIELKDIYKIYGEGLESEVRALDGISLNIDRGEFVAIVGQSGSGKSTMMNVLGCLDIPTRGDYLLDGVNVKELSD
KELSHIRNKQIGFIFQQYNLVQNLNVLENVELPLIYQGIGVEKRRELAMEALERVGLENRVKHKPTEMSGGQQQRVAIAR
AISTKPPIVMADEPTGALDSHTGHDVLKFLQQLNKDGSTVILITHDNGIAATARRVVRLADGKKIEDHPQEVDWL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-29 45
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-29 45
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-29 45
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-28 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
OBV_21100 YP_004881814.1 putative drug efflux ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 1e-50 54
OBV_21100 YP_004881814.1 putative drug efflux ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 6e-37 48
OBV_21100 YP_004881814.1 putative drug efflux ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 2e-33 47
OBV_21100 YP_004881814.1 putative drug efflux ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 4e-35 45
OBV_21100 YP_004881814.1 putative drug efflux ABC transporter ATP-binding protein NC_012469.1.7686946. Protein 2e-28 43