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Name : KKY_1680 (KKY_1680) Accession : YP_004899446.1 Strain : Pelagibacterium halotolerans B2 Genome accession: NC_016078 Putative virulence/resistance : Unknown Product : DNA-directed RNA polymerase subunit beta Function : - COG functional category : K : Transcription COG ID : COG0085 EC number : - Position : 1671282 - 1675424 bp Length : 4143 bp Strand : - Note : - DNA sequence : ATGGCTACCACGTTCAACGGGCGCCGCAAGGTGCGCAAGTCCTTTGGGTCGATTCGTGAAGTCACGGAGATGCCGAACCT GATCGAGGTGCAAAAGGCATCCTACGATCAGTTCCTGATGGTTGACGAACCTGAAGGCGGGCGGGCCGATGAGGGCCTGC AGTCTGTATTCAAATCGGTTTTCCCGATTACCGATTTTTCCAATACGGCGTCTCTCGAATTCGTGCGCTTCGAATTCGAG CAGCCCAAATATGATGTCGAGGAATGCCGCCAACGCGACATGACCTTTGCCGCGCCGCTCAAGGTGACGCTGCGGCTGAT CGTGTTCGAGGTCGACGAAGACACCGGCGCCCGCTCGGTCAAGGACATCAAGGAGCAGGACGTCTATATGGGCGACATGC CCTTCATGACGTCGAACGGCACGTTCATCGTCAATGGCACCGAACGCGTCATCGTCTCCCAGATGCACCGTTCGCCCGGC GTGTTCTTCGATCACGACAAGGGCAAGACCCACTCGTCGGGCAAGCTGTTGTTTGCGGCGCGCATCATTCCCTATCGCGG TTCCTGGCTCGATATCGAATTCGACGCCAAGGACATCGTCTATGCGCGTATCGACCGCCGCCGCAAAATTCCGGTGACCT CGCTGCTCAAGGCGCTGGGCCTCGACGCCGAAGAAATTCTGGCCACCTATTACGACATTCAGACCTACGCCAAGGGCGAC AAGGGCTGGAGCAAGCCGTTCGACGCCGAGAAGATGAAGGGCACCAAGCCCGTTTACGATCTGATCGACGCCAAGACCGG AGACGTGGTCCACGAAGGTGGAGCGCGGCTGACGGCCCGTGCCGCGAAGAAGATCGTCGAATCCGGCGTGACCCATCTGC TGGCCACCGACGAAGATCTCTACGGCATGTATCTGGCCCGCGACATCGTCGACCTCTCCAACGGCGAAATCTTTGCCGAG GCAGGTGACGAGATCGACGAGAAGGTGCTGGCCACGCTGGTCGAGAAGGGGTTCGACGAGCTTCCGATCCTCGACATCGA TCACATCAATGTCGGTGCCTATATCCGCAACACGCTGGCCGTGGACAAGAACGAAAGCCGCGAAGACGCGCTGTTCGACA TCTACCGCGTGATGCGTCCGGGTGAGCCCCCCACCATCGACACCGCCGAAGCCATGTTCAACTCGCTGTTCTTCGACAGC GAGCGCTATGACCTTTCCGCGGTCGGCCGCGTGAAGATGAACATGCGCCTCGATCTCGATGCACCCGACACCATGCGTGT CCTGCGCAAGGAAGACATCGTCGCTGTGGTTCGCACCCTGGTCGAACTGCGTGACGGCAAGGGCGATATCGACGACATCG ACAATCTTGGCAACCGCCGTGTGCGTTCGGTCGGCGAATTGATGGAAAACCATTATCGTCTCGGCCTTCTGCGCATGGAA CGCGCCATCAAGGAGCGCATGAGCTCGGTCGAGATCGATACGGTGATGCCCCAGGACCTCATCAACGCCAAGCCGGCAGC GGCTGCGGTGCGTGAGTTCTTTGGTTCGTCCCAGCTTTCCCAGTTCATGGATCAGACCAACCCGCTTTCGGAAATCACCC ACAAGCGCCGTCTCTCGGCGCTTGGGCCGGGCGGTCTGACCCGCGAGCGCGCAGGCTTTGAAGTCCGCGACGTTCACGTG ACCCATTACGGCCGTATCTGCCCGATCGAAACGCCGGAAGGCCCCAACATCGGCCTGATCAACTCTCTGGCCACCTTCGC ACGGGTCAACAAGTACGGGTTCATCGAAACCCCGTACCGCAAGGTCGTGGACGGCAAGGTGACCGACGAGGTCGTCTATC TCTCGGCAATGGAAGAGGCCAAGCACCATGTTGCGCAGGCCAACGCCACGCTGAGCGACAAGGGCGAGTTCGTCAACGAA CTGGTCGTGGCCCGTCACGCCGGTGAGCCTTCGCTCACGCCGCGTGAAATGGTCGATCTGATGGACGTTTCGCCCAAGCA GGTGGTCTCGGTTGCCGCTTCGCTCATTCCGTTCCTGGAAAACGACGACGCCAACCGCGCTCTGATGGGCTCGAACATGC AGCGCCAGGCCGTGCCGCTCCTGCGCGCCGAAGCTCCGTTCGTGGGCACGGGCATGGAATCGGTTGTGGCGCGCGATTCG GGCGCCGCGATTGGCGCCCTGCGCACCGGTATCGTCGATCAGGTGGATGCGACCCGTATCGTTATCCGCGCGACGGAAGA AAACGATGCGTCCAAGTCGGGCGTCGACATCTACAACCTGATGAAGTTCCAGCGCTCGAACCAGTCGACCTGCATCAACC AGCGTCCGCTGGTTGTGGTTGGCGATCACGTCCAGGCCGGCGACATCATTGCAGATGGTCCTTCGACCGAACTGGGCGAT CTGGCCCTGGGCCGCAACGTGCTCGTCGCGTTCATGCCCTGGAACGGCTACAACTTTGAAGATTCGATCCTGCTTTCCGA AAAGATCGTTCAGGACGACGTCTTCACCTCGATCCATATCGAGGAATATGAAGTGATGGCCCGCGACACCAAGCTCGGAC CGGAAGAAATCACGCGCGACATTCCCAACGTTTCGGAAGAAGCGCTGAAAAATCTCGACGAGGCCGGTATCGTTCACATC GGTGCCGAGGTGCAGGCGGGCGATATTCTGGTGGGCAAGATCACGCCCAAGGGCGAAAGCCCGATGACGCCGGAAGAAAA ACTGCTGCGCGCCATCTTCGGCGAAAAGGCATCGGACGTCCGCGACACCTCGCTGCGCATCCCTCCCGGGGATGGTGGTA TCGTCGTGGAAGTGCGCGTGTTCAACCGTCACGGCATCGACAAGGACGAGCGTGCCATGGCGATCGAGCGTGAGGAAATC GAGCGCCTCGCCAAGGACCGTGACGACGAACAGTCGATCCTCGATCGCAACGTCTATGCGCGTCTCAAAGAGATGCTGTT CGGCAAGGCCGCCACGACCGGGCCCAAGGGCTATGTCGCGGGCACCAAGCTCAACGACTCGATCTTCGATGCCCATGCGC GGTCCAAGTGGTGGCAGTTTGCCGTCGAGGACGACAAGCTGATGAGCGAGATCGAATCGCTTCAGGGCCAGTACGACGAA AGCCGTCGTCTGCTCGAGCAGCGCTTCATCGACAAGGTCGACAAGCTGCAGCGCGGCGACGAGCTTCCGCCAGGCGTAAT GAAGATGGTCAAGGTGTTCGTTGCGACCAAGCGCAAGGTGCAGTCGGGCGACAAGATGGCCGGCCGTCACGGCAACAAGG GCGTTATCTCGCGCATCATGCCGGTCGAGGACATGCCGTTCCTCGAAGACGGTACGCATGTCGATATCGTGCTCAATCCG CTGGGCGTGCCTTCGCGCATGAATGTGGGTCAGATCCTCGAGACGCACCTTGGCTGGGCGGCTCGTGGCATGGGCCGCAA GATCGATGCGATGATGGACGCCTATCGGCAGTCCAAGGATGTGGCGCCGCTCAAGAAGGAAATCTCGGCTCTCTACGAGA ATGACGAGTATGTCGGCGACCTCGACGATGACGGCATCGTTCGTCTCGGCCAGCAGATCTCCAAGGGCGTTTCCATTGCG ACCCCGGTGTTCGACGGGGCCAAGGAAGCCGATATCGTCACCATGCTCGAAAGGGCAGGGCTCGACGGATCGGGGCAATC CACGCTCTATGACGGGCGTACGGGTGAAGAGTTCGACCGCAAGGTGACAGTGGGCTACATCTACATGCTCAAGCTGCACC ATCTTGTGGACGACAAGATCCACGCCCGTTCGATCGGCCCATACAGTCTGGTTACCCAGCAGCCGCTGGGCGGCAAGGCC CAGTTCGGCGGACAGCGGTTCGGTGAAATGGAGGTGTGGGCGCTCGAAGCTTATGGCGCTGCTTACACCTTGCAGGAAAT GCTCACCGTCAAGTCGGACGACGTTGCCGGGCGCACCAAGGTTTACGAAGCCATCGTGCGTGGCGACGACACCTTCGAAG CGGGCATCCCCGAGAGCTTCAACGTTCTCGTCAAGGAAATCCGCTCGCTGGGCCTCAATGTCGAATTGACCGACATGGAA GCGGACAATGACGAGCCGGGTGGCGATCCCGAACTCGCACCTCCTGCGGACGCGGCGGAATAA Protein sequence : MATTFNGRRKVRKSFGSIREVTEMPNLIEVQKASYDQFLMVDEPEGGRADEGLQSVFKSVFPITDFSNTASLEFVRFEFE QPKYDVEECRQRDMTFAAPLKVTLRLIVFEVDEDTGARSVKDIKEQDVYMGDMPFMTSNGTFIVNGTERVIVSQMHRSPG VFFDHDKGKTHSSGKLLFAARIIPYRGSWLDIEFDAKDIVYARIDRRRKIPVTSLLKALGLDAEEILATYYDIQTYAKGD KGWSKPFDAEKMKGTKPVYDLIDAKTGDVVHEGGARLTARAAKKIVESGVTHLLATDEDLYGMYLARDIVDLSNGEIFAE AGDEIDEKVLATLVEKGFDELPILDIDHINVGAYIRNTLAVDKNESREDALFDIYRVMRPGEPPTIDTAEAMFNSLFFDS ERYDLSAVGRVKMNMRLDLDAPDTMRVLRKEDIVAVVRTLVELRDGKGDIDDIDNLGNRRVRSVGELMENHYRLGLLRME RAIKERMSSVEIDTVMPQDLINAKPAAAAVREFFGSSQLSQFMDQTNPLSEITHKRRLSALGPGGLTRERAGFEVRDVHV THYGRICPIETPEGPNIGLINSLATFARVNKYGFIETPYRKVVDGKVTDEVVYLSAMEEAKHHVAQANATLSDKGEFVNE LVVARHAGEPSLTPREMVDLMDVSPKQVVSVAASLIPFLENDDANRALMGSNMQRQAVPLLRAEAPFVGTGMESVVARDS GAAIGALRTGIVDQVDATRIVIRATEENDASKSGVDIYNLMKFQRSNQSTCINQRPLVVVGDHVQAGDIIADGPSTELGD LALGRNVLVAFMPWNGYNFEDSILLSEKIVQDDVFTSIHIEEYEVMARDTKLGPEEITRDIPNVSEEALKNLDEAGIVHI GAEVQAGDILVGKITPKGESPMTPEEKLLRAIFGEKASDVRDTSLRIPPGDGGIVVEVRVFNRHGIDKDERAMAIEREEI ERLAKDRDDEQSILDRNVYARLKEMLFGKAATTGPKGYVAGTKLNDSIFDAHARSKWWQFAVEDDKLMSEIESLQGQYDE SRRLLEQRFIDKVDKLQRGDELPPGVMKMVKVFVATKRKVQSGDKMAGRHGNKGVISRIMPVEDMPFLEDGTHVDIVLNP LGVPSRMNVGQILETHLGWAARGMGRKIDAMMDAYRQSKDVAPLKKEISALYENDEYVGDLDDDGIVRLGQQISKGVSIA TPVFDGAKEADIVTMLERAGLDGSGQSTLYDGRTGEEFDRKVTVGYIYMLKLHHLVDDKIHARSIGPYSLVTQQPLGGKA QFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVAGRTKVYEAIVRGDDTFEAGIPESFNVLVKEIRSLGLNVELTDME ADNDEPGGDPELAPPADAAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00346 | YP_008207811.1 | DNA-directed RNA polymerase, beta subunit/140 kD subunit | Not tested | AbaR25 | Protein | 0.0 | 58 |
| BJAB0868_00350 | YP_008211676.1 | DNA-directed RNA polymerase, beta subunit/140 kD subunit | Not tested | AbaR26 | Protein | 0.0 | 58 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| KKY_1680 | YP_004899446.1 | DNA-directed RNA polymerase subunit beta | NC_002516.2.881699.p | Protein | 0.0 | 60 |
| KKY_1680 | YP_004899446.1 | DNA-directed RNA polymerase subunit beta | CP000675.2.gene392.p | Protein | 0.0 | 59 |
| KKY_1680 | YP_004899446.1 | DNA-directed RNA polymerase subunit beta | CP001138.1.gene4362. | Protein | 0.0 | 58 |
| KKY_1680 | YP_004899446.1 | DNA-directed RNA polymerase subunit beta | CP001918.1.gene250.p | Protein | 0.0 | 58 |
| KKY_1680 | YP_004899446.1 | DNA-directed RNA polymerase subunit beta | NC_002695.1.914942.p | Protein | 0.0 | 58 |
| KKY_1680 | YP_004899446.1 | DNA-directed RNA polymerase subunit beta | CP000034.1.gene3741. | Protein | 0.0 | 58 |
| KKY_1680 | YP_004899446.1 | DNA-directed RNA polymerase subunit beta | NC_009085.4918494.p0 | Protein | 0.0 | 58 |
| KKY_1680 | YP_004899446.1 | DNA-directed RNA polymerase subunit beta | NC_011595.7060572.p0 | Protein | 0.0 | 58 |
| KKY_1680 | YP_004899446.1 | DNA-directed RNA polymerase subunit beta | NC_010410.6003841.p0 | Protein | 0.0 | 58 |
| KKY_1680 | YP_004899446.1 | DNA-directed RNA polymerase subunit beta | NC_011586.7046027.p0 | Protein | 0.0 | 58 |
| KKY_1680 | YP_004899446.1 | DNA-directed RNA polymerase subunit beta | NC_010400.5987325.p0 | Protein | 0.0 | 58 |
| KKY_1680 | YP_004899446.1 | DNA-directed RNA polymerase subunit beta | NC_010611.6233925.p0 | Protein | 0.0 | 58 |
| KKY_1680 | YP_004899446.1 | DNA-directed RNA polymerase subunit beta | NC_008702.1.4609796. | Protein | 0.0 | 58 |
| KKY_1680 | YP_004899446.1 | DNA-directed RNA polymerase subunit beta | CP002695.1.gene18.p0 | Protein | 0.0 | 58 |
| KKY_1680 | YP_004899446.1 | DNA-directed RNA polymerase subunit beta | CP004022.1.gene2794. | Protein | 0.0 | 57 |
| KKY_1680 | YP_004899446.1 | DNA-directed RNA polymerase subunit beta | CP000647.1.gene4402. | Protein | 0.0 | 57 |
| KKY_1680 | YP_004899446.1 | DNA-directed RNA polymerase subunit beta | NC_011035.1.6448762. | Protein | 0.0 | 57 |
