Gene Information

Name : KKY_3293 (KKY_3293)
Accession : YP_004901031.1
Strain : Pelagibacterium halotolerans B2
Genome accession: NC_016078
Putative virulence/resistance : Virulence
Product : cytochrome c-type biogenesis protein CcmC heme lyase for CcmE
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0755
EC number : -
Position : 3269910 - 3270680 bp
Length : 771 bp
Strand : -
Note : -

DNA sequence :
ATGGTTCAGACCCAGCCCAAACCTGCCGAGCCGGGATGGTTCACCCGCATTGCCCATCCGGGGATGTTCATGGGGTGGTC
GCGTCATCTGGTTTTGCCGCTTTCGATCGTGACTGCGCTCGCCTTTGCAGTGGGCCTCTATTTTTCGTTCCTTGCTTCGC
CCGCCGATTATCAGATGGGCGATACAGTGCGCATGATGTATGTGCATGTGCCCAGCGCCTGGCTCAGCCAGTTCTGTTAC
GCGGTGATGTTCTGCTCGGCCATCGGCACGCTCGTCTGGCGCCATCCCATGGCTGATGTAAGCCAGAAAGCCGCCGTTCC
GCTGGGCGCCGCTTTCACGGCGCTGGCGCTTTTCACCGGCTCGATGTGGGGTCGGCCCACCTGGGGCACGTTCTGGGAAT
GGGACGGGCGCATGACCTCGACGCTGGTTCTGCTGTTCATCTATCTTGGGCTGATCGCCTTGTGGCGGGCCTTCGACGAT
CAGCTCAAGGCAGCCCGCATCGTTGCGGTTCTGACCCTGGTGGGGGCCATCAACATTCCGATCATCAAGTTTTCGGTCGA
TTGGTGGCAGACCTTGCACCAGCCTGCTTCCGTATTCAGGACCGACGGTCCGACCGTTGACGGCTCGATCCTTGTCCCGC
TGCTGGTCATGACGCTGGCGTTTTCGCTGCTGTTTCTGACCCTGCATCTGGTTCGCATGCGCACCGAAATCACCAAACGC
CGCATTCGCTCGCTGGAATTGGCTCAGGCTCGCGCGGGAGAAGGCGCATGA

Protein sequence :
MVQTQPKPAEPGWFTRIAHPGMFMGWSRHLVLPLSIVTALAFAVGLYFSFLASPADYQMGDTVRMMYVHVPSAWLSQFCY
AVMFCSAIGTLVWRHPMADVSQKAAVPLGAAFTALALFTGSMWGRPTWGTFWEWDGRMTSTLVLLFIYLGLIALWRAFDD
QLKAARIVAVLTLVGAINIPIIKFSVDWWQTLHQPASVFRTDGPTVDGSILVPLLVMTLAFSLLFLTLHLVRMRTEITKR
RIRSLELAQARAGEGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ccmC AAN62109.1 putative heme exporter protein C Not tested PAGI-2(C) Protein 8e-29 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
KKY_3293 YP_004901031.1 cytochrome c-type biogenesis protein CcmC heme lyase for CcmE VFG1856 Protein 5e-20 43