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Name : clpC (SCAT_0642) Accession : YP_004910187.1 Strain : Streptomyces cattleya NRRL 8057 Genome accession: NC_016111 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease ATP-binding subunit clpC Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 724610 - 727132 bp Length : 2523 bp Strand : + Note : - DNA sequence : ATGGGTCCGCAGGGCTACGGTCCGGACCCGTTCGGAGAGTTCTTCGCACGCTTCTTCGGCGGCGGGCCCCGGCCGGGATC ACGGCAGATCGACATCGGACGGCTGATGAGCGAGCCGGCCCGGCAACTGGTGGCCGACGCCGCCAGTTACGCCGCCGAGC ACGGCAGCAGTGACCTGGACACCGAGCATCTGCTGCGCGCGGCGCTGACCACCGAGCCCACCCGCAGTCTGGTGGCGCGC TCGGGCGCCGACCCGGACCGGATCGCCGCCGACATCGACAGCCGGGCCGGGGCCGGGCCGCCGAAGGACTCGCTGGCCGT CACCCCGGCGGTCAAGCGAGCACTGCTGGACGCCGCCGACCTGGCCCGGTCCGCCGGCTCCTCGTACATCGGGCCCGAGC ACGTGCTGCGGGCGCTGGCGGCCAACCCCGACTCGGCGGCCGGGCACATCCTGGGCTCCGCCCACTTCGACGCGCGCGGT GCCCGGCCGGGCCCGCCGGGGCAGCCCCCGCAGGGCGCCGGCTGGCCGGGCGGCGAGGCCGGCGCACCCGCGCCCCGGCA CGACACGCCCAACCTCGACCGGTTCGGCCGGGACCTGACCGAGCTGGCCCGGGCCGGCCGGATCGACCCGGTGATCGGCC GCGAGGAGGAGATCGAGCAGACCATCGAGGTGCTCTCCCGGCGCGGCAAGAACAACCCGGTGCTCATCGGGGACGCCGGC GTCGGCAAGACCGCCATCGTCGAGGGGCTGGCCCAGCGCATCGCCGACGGCGAGGTGCCCGACACCCTGCTGGGCCGCCG GGTGGTCTCCCTGGACCTGTCCGGTGTGGTGGCCGGCACCCGTTACCGCGGTGACTTCGAGGAGCGGCTCAACGGGATCG TCGAGGAGATCCGGACGCACTCCGGTGAGGTGATCGTCTTCATCGACGAGCTGCACACCGTGGTGGGCGCCGGTGGCGGG GGCACCGAGGGCGGCTCGATGGACGCCGGCAACATCCTCAAGCCGCCGCTCTCCCGTGGCGAGCTGCACGTCATCGGGGC CACCACGCTGGAGGAGTACCGGCGCTACATCGAGAAGGACGCGGCGCTGGCCCGCCGGTTCCAGCCCATCCTGGTGCCCG AGCCGACCACCGCCGACACCCTGGAGATCCTGCGCGGCCTGTCCGACCGGTACGAGGCCCACCACCAGGTGCGCTACACC GACCAGGCGCTGGTGGCCGCGGTGGAGCTGTCCGATCGCTACCTCACCGACCGCTTCCTGCCCGACAAGGCCATCGACCT GATGGACCAGGCCGGCGCCCGGGTGCAGTTGCGTACCCACACCAAGGGCACCGATGTGCGGGCGCTGGAGCGGCAGTTGG AGCAGCTGACCCGGGACAAGGACCAGGCGGTGGCGGCCGAGTCCTACGAGCGGGCCACCGAGCTGCGCGACCGGATCACC GAGCTGAACCGCCGGATCGACGCGGCCCGGGAAGGCAGCCAGGGCGAGGAGCACGGCGACGGGAAGGTGGTCGAGGTCAC CGCGGAGGACATCGCCGAGGTGGTCTCCCGGCAGACCGGCATCCCGGTCAAGAGCCTCACCGAGGAGGAGCGCGACCGGC TGCTGGGCCTGGAGGAGCATCTGCACCAGCGGGTGATCGGGCAGGACGAGGCGGTCACCGCGGTCGCCGACGCGGTGCTG CGTTCCCGGGCCGGACTGGCCGACCCCAACCGTCCGATCGGCAGCTTCCTGTTCCTCGGCCCCACCGGGGTGGGCAAGAC CGAGCTGGCCCGGGCGCTGGCCGAGGCGCTCTTCGGCAGCGAGGACCGGATGGTGCGGCTGGACATGAGCGAATACCAGG AACGCCACACGGTCAGCCGGCTGGTGGGCGCCCCGCCCGGTTACGTCGGCCACGACGAGGCCGGACAGCTCACCGAGGCG GTCCGCCGCCACCCCTACTCGCTGGTGCTGCTGGACGAGGTGGAAAAAGCCCACCCCGATGTCTTCAACACCCTGCTCCA GGTGCTGGACGACGGACGGCTGACCGACGCGCAGGGCCGTACCGTCGACTTCAAGAACACGGTCGTGGTGATGACCAGCA ACCTCGGTTCGGAGACGGCCGGCGGTCCGGCGCTGGGCTTCGGCGCGGGGGCCGGCGGCGACGACGAGGAGAGGGAGCGG ACGCTGCGCCCGCTGCGGCAGCACTTCCGCCCGGAGTTCCTCAACCGCATCGACGAGATCGTGGTCTTCCGCCGGCTCAC CGACGACCAGCTGCGGCAGATCACCGATCTGCTGCTGGAGGAGACCCGGCGGCGGCTGCACGCCCAGGGGGTGGCGGTGG ACTTCTCCCCGGCGGCGGTGGACTGGCTGGCCCGCCGCGGCCACCAGCCCGAGTACGGTGCCCGGCCGCTGCGCCGCACC ATCCAGCGCGAGATCGACCGGCCGCTGTCGCGGTTGCTGCTGGACGGCAAGGTGCCCTCCGGCTCGCGGGTGCGGGTGGA GGTCGAGGACGACCGGCCGGCGTTCCGTACCGGCCGGGGCTGA Protein sequence : MGPQGYGPDPFGEFFARFFGGGPRPGSRQIDIGRLMSEPARQLVADAASYAAEHGSSDLDTEHLLRAALTTEPTRSLVAR SGADPDRIAADIDSRAGAGPPKDSLAVTPAVKRALLDAADLARSAGSSYIGPEHVLRALAANPDSAAGHILGSAHFDARG ARPGPPGQPPQGAGWPGGEAGAPAPRHDTPNLDRFGRDLTELARAGRIDPVIGREEEIEQTIEVLSRRGKNNPVLIGDAG VGKTAIVEGLAQRIADGEVPDTLLGRRVVSLDLSGVVAGTRYRGDFEERLNGIVEEIRTHSGEVIVFIDELHTVVGAGGG GTEGGSMDAGNILKPPLSRGELHVIGATTLEEYRRYIEKDAALARRFQPILVPEPTTADTLEILRGLSDRYEAHHQVRYT DQALVAAVELSDRYLTDRFLPDKAIDLMDQAGARVQLRTHTKGTDVRALERQLEQLTRDKDQAVAAESYERATELRDRIT ELNRRIDAAREGSQGEEHGDGKVVEVTAEDIAEVVSRQTGIPVKSLTEEERDRLLGLEEHLHQRVIGQDEAVTAVADAVL RSRAGLADPNRPIGSFLFLGPTGVGKTELARALAEALFGSEDRMVRLDMSEYQERHTVSRLVGAPPGYVGHDEAGQLTEA VRRHPYSLVLLDEVEKAHPDVFNTLLQVLDDGRLTDAQGRTVDFKNTVVVMTSNLGSETAGGPALGFGAGAGGDDEERER TLRPLRQHFRPEFLNRIDEIVVFRRLTDDQLRQITDLLLEETRRRLHAQGVAVDFSPAAVDWLARRGHQPEYGARPLRRT IQREIDRPLSRLLLDGKVPSGSRVRVEVEDDRPAFRTGRG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 4e-158 | 54 |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 4e-93 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_004910187.1 | ATP-dependent Clp protease ATP-binding subunit clpC | VFG0079 | Protein | 2e-173 | 51 |
| clpC | YP_004910187.1 | ATP-dependent Clp protease ATP-binding subunit clpC | VFG0080 | Protein | 2e-145 | 51 |
