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Name : cycK (MEALZ_2507) Accession : YP_004917773.1 Strain : Methylomicrobium alcaliphilum 20Z Genome accession: NC_016112 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis heme lyase CycK Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 2878509 - 2880467 bp Length : 1959 bp Strand : - Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 11744735, 7635817; Product type e : enzyme DNA sequence : ATGATTCCTGAGCTGGGGCATTTTTCCTTAATACTGGCTTTGTGCATGGCCGTGATGTTGGGTATTGTCCCTATCGTCGG TAGTTTTCGTGCGATTCCTGGATGGATTGCCGTGGCGCGTCCCGCCGCGTTCGGGCAATTGTTCTTTGTCGGCTTGTCTT ATTTGTGTCTGACGTATGCGTTTTTGACGCATGATTTTTCGGTCGCCTATGTCGCGAACAATTCGAATACTCATTTGCCG GTACTATATTTAGTCTCCGGCGTATGGGGCGCGCATGAAGGCTCATTGTTACTTTGGGCCTTGAGTTTGACGATCTGGAC CGGTTTGGTTGCGCAGTTTAGCCGCAGTATTCCGGACGCGACGATTGCACGGGTTCTCGGTGTGATGGGCTTGGTAAGTA TCGGTTTTCTACTGTTCTTGTTGCTGACCTCGAATCCGTTCGAGCGCATGATTCCGGCGCCGCCTGAAGGCCGCGATTTG AATCCTCTGTTGCAAGACCCTGGGCTCGCGATTCATCCGCCGATGTTATACATGGGTTATGTCGGCTTTTCGGTCGCGTT TGCGTTCTCGATCGCGGCCTTGCTCGAAGGTCGTTTGGACAGCGCCTGGGCACGTTGGTCCAGACCTTGGACCAATATCG CCTGGATGTTTCTGACTTTGGGCATCACGCTGGGCAGTTGGTGGGCTTATTACGAATTAGGCTGGGGCGGCTGGTGGTTT TGGGACCCGGTCGAGAACGCTTCGTTTATGCCTTGGCTGGTCGGCACGGCGTTGATTCATTCATTGGCAGCCAGTGAAAA ACGCGGTGTGTTCAAGACTTGGACCGTGCTGTTGGCGATTTTCGCGTTTTCGTTAAGTCTGCTGGGGACTTTTTTGGTCC GTTCCGGCGTATTGACCTCGGTGCATGCCTTTGCCAGCGATCCGGCCCGCGGTTTGTTCATTTTGATTTTTTTGGCTATT GTCGTCGGCGGATCTTTATTGCTCTATGCGATTAGAGCGCCGGCGGTTAAAAGCAGCGCCAGTTTCGAAATGATTTCGAA AGAATCCGCATTACTGTTGAATAACGTGCTGCTGGTCGTGACGGCGGCCAGCATTTTGGTCGGCACCTTGTATCCTTTGT TTATCGATGCCTTGGGCATGGGCAAGATTTCGGTCGGTCCCCCTTATTTCAATGCGATTTTTATTCCTTTGATGGCACCG CTTGCCGTGGTCTCGGGTATCGGCGTTTTGCTGCGCTGGAAAAAAGACCAGTTCAATGCGCTCGCGCTACGAATCCGGTG GCTGATGCTGGGCTGCCTGGTGCTCGGCGCGGCATTGCCGTTGTTGATGCCCTTTTATTCGTGGGCTGCCGCGATCGGTT TGACGTTGGCGCTATGGACGACGGCGCTGACCGGACTGGCCTTTTCGGAGCGTTTAGGGCATAAAATGCCTGATTTTACA GCCTTGCTGAAAGTGCCGAGAGCCTTTTACGGCATGACCTTGGCGCATTTGGGTATTGCGGTCTTCATCGTCGGGATTAC CTTGACCTCGGTTTATAGCATCGAAAAAGACGTTAGAATGGCCCCCGGCGACAAGCTAGAAATGTCCGGTTATGTGTTCG AATTTCATGGTATCGATGTAGTCGATGGGCCGAATTATCGGGCGCAACAAGGCCACTTGACGGTCAGTTACGATGATAAG ACGGTGGCTAAACTCGAACCTCAAAAAAGAATTTATCGCGTGCAACAAATGCCGATGACCGAGGCCGCGATCGATGCCGG TCTGTTTCGCGATCTTTTTGTCGCGATCGGCGAACCGTTGGGCGATTCGGGCGCATGGAGTATGCGCGTTTATTATAAAG CCTTTATACGGTGGATATGGATCGGCGGTGTTTTCATGGCATTGGGCGGTCTCTGGGCTGTCTGCGACAGACGTTATCGA ATAGGCAATAAAAAACAGCGAGTCAGCAAAAATGCTTAA Protein sequence : MIPELGHFSLILALCMAVMLGIVPIVGSFRAIPGWIAVARPAAFGQLFFVGLSYLCLTYAFLTHDFSVAYVANNSNTHLP VLYLVSGVWGAHEGSLLLWALSLTIWTGLVAQFSRSIPDATIARVLGVMGLVSIGFLLFLLLTSNPFERMIPAPPEGRDL NPLLQDPGLAIHPPMLYMGYVGFSVAFAFSIAALLEGRLDSAWARWSRPWTNIAWMFLTLGITLGSWWAYYELGWGGWWF WDPVENASFMPWLVGTALIHSLAASEKRGVFKTWTVLLAIFAFSLSLLGTFLVRSGVLTSVHAFASDPARGLFILIFLAI VVGGSLLLYAIRAPAVKSSASFEMISKESALLLNNVLLVVTAASILVGTLYPLFIDALGMGKISVGPPYFNAIFIPLMAP LAVVSGIGVLLRWKKDQFNALALRIRWLMLGCLVLGAALPLLMPFYSWAAAIGLTLALWTTALTGLAFSERLGHKMPDFT ALLKVPRAFYGMTLAHLGIAVFIVGITLTSVYSIEKDVRMAPGDKLEMSGYVFEFHGIDVVDGPNYRAQQGHLTVSYDDK TVAKLEPQKRIYRVQQMPMTEAAIDAGLFRDLFVAIGEPLGDSGAWSMRVYYKAFIRWIWIGGVFMALGGLWAVCDRRYR IGNKKQRVSKNA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 2e-152 | 58 |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 5e-126 | 54 |
