Gene Information

Name : cspD (MEALZ_3187)
Accession : YP_004918437.1
Strain : Methylomicrobium alcaliphilum 20Z
Genome accession: NC_016112
Putative virulence/resistance : Unknown
Product : cold-shock protein CspD
Function : -
COG functional category : K : Transcription
COG ID : COG1278
EC number : -
Position : 3692033 - 3692254 bp
Length : 222 bp
Strand : -
Note : Evidence 2b : Function of strongly homologous gene; PubMedId : 1622933, 21160192, 2186030, 94293754, 97405911, 9868784; Product type r : regulator

DNA sequence :
ATGAATACTGCAGCAATGACTACCGGCACCGTTAAATGGTTTAATTCAGATAAAGGTTTCGGTTTTATCGAACAACAACA
AGGTCCGGACGTTTTCGTCCATTTCCGGAATATCCTGAGCGGCACCAGCAGCTACAAATCACTGGATGAAGGCCAACACG
TTCAGTTTAAAATTACTCGCGGTCCAAAAGGTCCGCAAGCCGAAGAAGTCACGGTTATCTAA

Protein sequence :
MNTAAMTTGTVKWFNSDKGFGFIEQQQGPDVFVHFRNILSGTSSYKSLDEGQHVQFKITRGPKGPQAEEVTVI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 2e-13 56