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Name : MEALZ_0496 (MEALZ_0496) Accession : YP_004915793.1 Strain : Methylomicrobium alcaliphilum 20Z Genome accession: NC_016112 Putative virulence/resistance : Unknown Product : protein-export membrane protein SecD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 547789 - 549636 bp Length : 1848 bp Strand : + Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pt : transporter DNA sequence : ATGCAAAATCGTTTCCCACTCTGGAAAAATCTATTAATCCTGATCGTCTTTTTGATTGGGCTTATTTATGCCTTACCCAA TCTTTTCGGCGACGATCCGTCGGTTCAGGTGTCCTTCTCGAATGCCACTACGGTCGAGACCGCCCAGGTTCAGCAGATAG AAGAATTGGTCAAGCAAGCCGGAATGATCATTAAAGAAGTTGAAACCGGTAATGGAAATGTCTTGGTTCGTTTCAACGAT ACCAACGACCAATTGAAAGCGGCGGATTTGCTGAGGGATAGACTGGGAAACGATGCTACTGTCGCGCTTAACTTGGCGCC CGCGACGCCGGGTTGGCTGCGGGCGCTTGGTGCAAGCCCTATGTATCTAGGTCTTGATTTGCGCGGCGGCGTGCATTTTA TGCTTGAAGTCGATATGGATGCCGCGGTTAAGCAAGCCGAAGAGCGTTATAACGATGACGTTCGTTCCGCCTTGCGCGAT GCCAAAATCCGTTACCAGTCTGTGTCGCAAGAGACCGGCTATATCCGTGTTAAGTTGAGAAGTGAAGAAGACACCAATGC CGCGGTTGCGGTGCTGGACAAGGATTTTTCGACACTGAATATCGAACGCCCGAATGTCGAGAACGAGCTTTGGCTCAGGA TTACCGACGCCGAGCAAAAAGAAGTCAAAAAATTCGCGCTGGCGCAAAATATCACGACCTTGCGTAACCGGGTCAACGAG TTAGGTGTCGCCGAACCGGTCATCCAACAGCAAGGCAACAACCGTATCGTTGTGCAATTGCCCGGTATTCAAGACACGAC CCGAGCCAAGGATATTCTAGGTACGACGGCGACATTAGAATATCGCTTGGTCGACGTCGAGCATGACGTGCAAAAAGCAT TGAAAGGACGCCCGCCGGTCGGCAGCCGCATCTATTACGAGAAAAACGGTAATCCGATTCTATTAGATAGACGCATCATC GTGACCGGCGATCAGATCGTCGACGCTTCGTCCGGTTTGGATCAAAACAGTTCGCCTGCAGTATTCGTGACTTTGAACGG TATCGGCGCGAAGAAAATGGGTAAGGTGACCAGCGAGAATATCGGTCGGCCAATGGCGGTCGTGTTCGTCGAATATAAAG TAAAAACGCGTGAAGTTAACGGCGAAAAAGTTAGGACCAAGGAAAAGGTTGAAAAAGTGATCAGCATCGCGACGATTCGC GATGCGTTTAGTAAGCGTTTCCAAACCACCGGTCTCGATAGCACTACGGAAGCCCGTAATTTGGCTTTATTGCTTAGAGC AGGCGCCTTGGCAGCTCCGGTCGATATCGTCGAAGAGCGCACTGTCGGTCCGAGCCTCGGTCAAGATAATATCGATCAAG GGATGAGGTCGGTTATGGTCGGTTTTGTTCTGGTGTTGTTATTCATGGCGGCTTATTACCGCGTGTTCGGTCTGGTCGCG AATCTGGCGCTGGGTTTCAATCTGGTTCTGGTTGTCGCGGTGCTTTCGATGTTGCAGGCCACGCTGACTATGCCGGGCAT TGCCGGGATCGTGCTGACCATCGGTATGGCGGTCGATGCGAACGTGCTGATTTTTGAGCGCATTCGCGAGGAAATCAAAA ACGGCAACACGCCGCAATCGAGTATCTTTGCCGGTTACGAAAAAGCCTTCGGGACGATTTTCGATGCCAATATCACGACG CTTTTGGTGGCCTTGGTCTTGTTCGGATTCGGCACGGGGCCGGTCAAAGGTTTCGCGGTGACACTGTCGATCGGGATTTT ATCGTCGATGTTCACGGCCATTTTAGGCACTCGCATGGTAATTAACTGGATTTACGGCAGTCGCCGTGTCGAGAAATTGT CGATTTAG Protein sequence : MQNRFPLWKNLLILIVFLIGLIYALPNLFGDDPSVQVSFSNATTVETAQVQQIEELVKQAGMIIKEVETGNGNVLVRFND TNDQLKAADLLRDRLGNDATVALNLAPATPGWLRALGASPMYLGLDLRGGVHFMLEVDMDAAVKQAEERYNDDVRSALRD AKIRYQSVSQETGYIRVKLRSEEDTNAAVAVLDKDFSTLNIERPNVENELWLRITDAEQKEVKKFALAQNITTLRNRVNE LGVAEPVIQQQGNNRIVVQLPGIQDTTRAKDILGTTATLEYRLVDVEHDVQKALKGRPPVGSRIYYEKNGNPILLDRRII VTGDQIVDASSGLDQNSSPAVFVTLNGIGAKKMGKVTSENIGRPMAVVFVEYKVKTREVNGEKVRTKEKVEKVISIATIR DAFSKRFQTTGLDSTTEARNLALLLRAGALAAPVDIVEERTVGPSLGQDNIDQGMRSVMVGFVLVLLFMAAYYRVFGLVA NLALGFNLVLVVAVLSMLQATLTMPGIAGIVLTIGMAVDANVLIFERIREEIKNGNTPQSSIFAGYEKAFGTIFDANITT LLVALVLFGFGTGPVKGFAVTLSIGILSSMFTAILGTRMVINWIYGSRRVEKLSI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 2e-113 | 48 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 2e-113 | 47 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 2e-113 | 47 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 2e-113 | 47 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 8e-114 | 47 |
