Gene Information

Name : Sfla_3340 (Sfla_3340)
Accession : YP_004924278.1
Strain : Streptomyces flavogriseus ATCC 33331
Genome accession: NC_016114
Putative virulence/resistance : Virulence
Product : ATP-dependent chaperone ClpB
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 3857419 - 3860019 bp
Length : 2601 bp
Strand : +
Note : TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Clp domain protein; Clp ATPase-like; KEGG: sgr:SGR_3426 ATP-dependent protease subunit; SMART: AAA ATPase

DNA sequence :
GTGGACGCCGAGCTGACCAACAAGAGCCGGGACGCCCTCAACGCGGCCACCGCAAGGGCCGTCAAGGACGGACACCCGGA
CCTGACCCCCGGGCACCTGCTGCTGGCGTTGCTCGCGGGCGAGGACAACGCCAACATCACCGATCTGCTGGCCTCCGTCG
AGGCCGACCAGGTGGTCGTGCGCGAGGAGACCGAGCGGATCCTCGGCGCGCTGCCCAGCGTCACCGGGTCGACCGTCGCG
CCGCCGCAGCCCAGCCGCGAGCTGCTCGCCGTGCTCGCCGACGCCGACCGGCGCGCCAAGGAGCTCGGTGACGACTACCT
CTCCACCGAGCACCTGCTCATCGCCGTCGCGGCGAAGGGCGGCCGTGCCGGTGAGATCCTCGACGGGCAGGGAGCCGGCG
CGAAGAAGCTGCTGGACGCATTCGAGAAGAGCAGGGGAGGGCGCCGGGTGACCACTCCCGACCCCGAAGGCCAGTACAAG
GCGCTGGAGAAGTTCGGCACCGACTTCACCGCGGCCGCCCGCGAGGGCAAGCTCGACCCGGTCATCGGCCGTGACCAGGA
GATCCGCCGGGTCGTGCAGGTGCTGTCGCGCCGCACGAAGAACAACCCCGTGCTCATCGGTGAGCCCGGCGTCGGCAAGA
CGGCCGTGGTCGAGGGGCTCGCCCAGCGCATCGTCAAGGGCGACGTCCCCGAGTCCCTCCGGAACAAGCGGCTCGTCTCC
CTGGACCTGGGCGCGATGGTCGCGGGTGCCAAGTACCGCGGCGAGTTCGAGGAACGCCTGAAGACCGTCCTCTCCGAGAT
CAAGGAGAGCGACGGGCAGATCATCACCTTCATCGACGAGCTGCACACGGTCGTCGGCGCGGGCGCGGGCGGCGACTCCG
CGATGGACGCGGGCAACATGCTGAAGCCGATGCTCGCCCGCGGTGAGCTGCGGATGGTCGGCGCCACCACGCTCGACGAG
TACCGCGAGCGCATCGAGAAGGACCCCGCCCTGGAACGCCGCTTCCAGCAGGTCCTGGTGGCCGAGCCGTCCGTCGAGGA
CACCATCGCGATCCTGCGTGGCCTCAAGGGCCGCTACGAGGCACACCACAAGGTCCAGATCGCCGACTCCTCGCTGGTGG
CCGCCGCGACCCTCTCGGACCGCTACATCACCTCCCGCTTCCTCCCCGACAAGGCGATCGACCTCGTCGACGAGGCGGCC
TCCCGGCTCCGCATGGAGATCGACTCCTCGCCCCTGGAGATCGACGAGCTCCAGCGCTCCGTGGACCGGCTGCACATGGA
GGAGCTGGCGCTCAGGAACGAGACCGACCAGGGCTCCAAGCAGCGGCTGGAGAAGATCCGCCGCGACCTCGCCGACAAGG
AGGAGGAGCTGCGCGGTCTGACCGCCCGCTGGGAGAAGGAGAAGCAGGGCCTGAACCGCGTCGGCGAGCTGAAGGAACGC
CTCGACGAACTGCGCGGCCAGGCCGAGCGTGCCCAGCGCGACGGAGACTTCGACACCGCGTCCAAGCTGCTCTACGGCGA
GATCCCCGGACTGGAGCGCGAGCTGGCCGAGGCGGACGAGGCCGAGCAGGAGGCCGCCGTCGACACCATGGTCAAGGAGG
AGGTCGGCCCGGACGACATCGCCGACGTCGTCGGCGCGTGGACCGGCATCCCGGCCGGACGCCTGCTGGAGGGCGAGACG
CAGAAGCTCCTGCGCATGGAGTCCGAGCTGGGCAGGCGGCTGATCGGGCAGGGCGAGGCCGTCCGGGCCGTGTCGGACGC
CGTACGCCGCACCCGCGCCGGGATCGCCGACCCCGACCGGCCCACCGGCTCGTTCCTCTTCCTCGGCCCGACCGGGGTCG
GTAAGACGGAGCTGGCCAAGGCGCTCGCGGACTTCCTCTTCGACGACGAGCGGGCCATGATCCGCATCGACATGAGCGAG
TACGGCGAGAAGCACAGCGTCGCCCGGCTCGTCGGTGCCCCGCCCGGCTACGTCGGCTACGAGGAGGGCGGCCAGCTCAC
GGAGGCGGTGCGCCGCCGCCCGTACAGCGTCGTGCTGCTGGACGAGGTCGAGAAGGCCCACCCCGAGGTCTTCGACATCC
TGCTCCAGGTGCTCGACGACGGCCGGCTCACCGACGGGCAGGGCCGGACGGTGGACTTCCGCAACACCATTCTGGTCCTC
ACGTCGAACCTGGGCAGTCAGTTCCTGGTCGACCCCCTGACCGGGCCCGAGGTGAAGAAGGAGCGGGTGCTGGACGTCGT
ACGCGCCTCGTTCAAGCCGGAGTTCCTCAACCGGCTCGACGACCTGGTCGTCTTCTCCGCTCTCTCCGGGGACGAGCTGG
CCCACATCGCGGGGCTCCAGGTGGCCCGTCTCGCCGACCGGCTGGCCGACCGCCGCATCCGGCTGGACGTCACCCCGGAC
GCCCTGGCCTGGCTGGCCGAGGAGGGCAACGACCCGGCGTACGGCGCCCGGCCGCTGCGCCGCCTGATCCAGACCGCGAT
CGGCGACCGGCTCGCCAGGGAGATCCTCGCCGGCGAGGTCAGGGACGGCGACACGGTCCGTGTGGACCGGGCCGGCGACG
GACTGACCGTGGGTCCCGCTCCGGCGCCGAAGACCCTGTAG

Protein sequence :
MDAELTNKSRDALNAATARAVKDGHPDLTPGHLLLALLAGEDNANITDLLASVEADQVVVREETERILGALPSVTGSTVA
PPQPSRELLAVLADADRRAKELGDDYLSTEHLLIAVAAKGGRAGEILDGQGAGAKKLLDAFEKSRGGRRVTTPDPEGQYK
ALEKFGTDFTAAAREGKLDPVIGRDQEIRRVVQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVKGDVPESLRNKRLVS
LDLGAMVAGAKYRGEFEERLKTVLSEIKESDGQIITFIDELHTVVGAGAGGDSAMDAGNMLKPMLARGELRMVGATTLDE
YRERIEKDPALERRFQQVLVAEPSVEDTIAILRGLKGRYEAHHKVQIADSSLVAAATLSDRYITSRFLPDKAIDLVDEAA
SRLRMEIDSSPLEIDELQRSVDRLHMEELALRNETDQGSKQRLEKIRRDLADKEEELRGLTARWEKEKQGLNRVGELKER
LDELRGQAERAQRDGDFDTASKLLYGEIPGLERELAEADEAEQEAAVDTMVKEEVGPDDIADVVGAWTGIPAGRLLEGET
QKLLRMESELGRRLIGQGEAVRAVSDAVRRTRAGIADPDRPTGSFLFLGPTGVGKTELAKALADFLFDDERAMIRIDMSE
YGEKHSVARLVGAPPGYVGYEEGGQLTEAVRRRPYSVVLLDEVEKAHPEVFDILLQVLDDGRLTDGQGRTVDFRNTILVL
TSNLGSQFLVDPLTGPEVKKERVLDVVRASFKPEFLNRLDDLVVFSALSGDELAHIAGLQVARLADRLADRRIRLDVTPD
ALAWLAEEGNDPAYGARPLRRLIQTAIGDRLAREILAGEVRDGDTVRVDRAGDGLTVGPAPAPKTL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 9e-99 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sfla_3340 YP_004924278.1 ATP-dependent chaperone ClpB VFG2084 Protein 3e-105 42