Gene Information

Name : rnhA (DSC_12010)
Accession : YP_004931087.1
Strain : Pseudoxanthomonas spadix BD-a59
Genome accession: NC_016147
Putative virulence/resistance : Unknown
Product : ribonuclease H
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0328
EC number : -
Position : 2409536 - 2409994 bp
Length : 459 bp
Strand : -
Note : COG0328 Ribonuclease HI

DNA sequence :
ATGAAACAGATCACCATCCATGCCGACGGCTCCTGCCTGGGCAACCCCGGGCCCGGCGGCTGGGCGGCGTTGCTGCGCTA
CGGCGCGATCGAGCGCGAGCTCTCCGGCGGCGAAGCCCATACCACCAACAACCGCATGGAACTGATGGCCGCCATCATGG
CGCTGGAGGCCCTGACCGAACCCTGCCAGGTCACCCTGATCAGCGACTCGCAGTACGTGCGCCAGGGCATCAGCGAATGG
CTGCCCGGCTGGATCCGCAAGAACTGGAGGACCGCCGGCGGCGGCGCGGTCAAGAACCGCGAGCTGTGGGAGCGGCTGCA
GGCGGCCACGCTGCGCCACCAGATCGACTGGCGCTGGGTCAAGGGGCATTCGGGCGATCCGGACAACGAGCGGGTGGACC
TGCTGGCCCGCGATCAGGCCATCGCGGTGCGCAACGGCGCCCCGGCCCCAGTGGCATGA

Protein sequence :
MKQITIHADGSCLGNPGPGGWAALLRYGAIERELSGGEAHTTNNRMELMAAIMALEALTEPCQVTLISDSQYVRQGISEW
LPGWIRKNWRTAGGGAVKNRELWERLQAATLRHQIDWRWVKGHSGDPDNERVDLLARDQAIAVRNGAPAPVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rnhA AAO17224.1 RnhA Not tested tcd island Protein 2e-31 59