Gene Information

Name : Tlie_1478 (Tlie_1478)
Accession : YP_004933299.1
Strain : Thermovirga lienii DSM 17291
Genome accession: NC_016148
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG3959
EC number : -
Position : 1546910 - 1547740 bp
Length : 831 bp
Strand : -
Note : PFAM: Transketolase, thiamine diphosphate binding domain; COGs: COG3959 Transketolase N-terminal subunit; InterPro IPR005474; KEGG: dae:Dtox_3968 transketolase domain protein; PFAM: Transketolase domain-containing protein; SPTR: Transketolase domain prote

DNA sequence : 
ATGGAAGAGAGTAAGAGAAAGCGGCTTCAAGAGCTCGCTCGAACTATTCGCTGCGATATCATAAAAATGCTTGAAGCTGC
GGGGTCTGGGCATCCAGGAGGTTCTTTGTCGGCTGTAGAGATAGTTACTGCATTGTATTTCGAGGTAATGAGGCACGATC
CTCAAAACCCCCAGTGGCCAGATAGGGACAGGTTAATTCTTTCGAAAGGCCATGCATGTCCAGTGGTCTACGCCGCCCTG
GCCGAAGCTGGTTACTTCCCAAAGGAAGAACTGCTCACCTTGAGGAAGTTCGGATCAAGGCTTCAAGGACACCCTGACAG
GAAGAAACTTCCTGGTTTGGAAGCATCCACAGGAAGTCTTGGTCAAGGATTGTCCATAGCGGCTGGGATAGCCTTGGGAT
TCAAGATGGATGGAAAAAGAAACGATGTGTATTGCTTGATGGGAGATGGGGAGCTCAACGAAGGACAGATTTGGGAGGCA
GCGATGACGGCATCACACTACAAGCTCGATAACCTGTGTGGAATAGTGGACCATAACTGCCTTCAGATCGACGGTTGGAC
GTGTGAAGTCAAGAACATGGAACCCCTTGTGGATAAGTGGAAAGCCTTTGGCTGGAACGTCCTGGAAGTTGACGGCCACA
ATATAGAAGAGGTAGTTGCGGCCTTTAGGCGGTTCAAACACACTCATTTCAAGCCTACTGTGATAATAGCCCATACCATT
AAGGGTAAAGGTGTGTCCTTCATGGAGGACAACGCGGCATGGCACGGTAAGGCACCTAACAGAGAGCAGGCAGCCTTGGC
GTTGGAAGAGCTCTGCGGGGGGTGTTGCTAA

Protein sequence : 
MEESKRKRLQELARTIRCDIIKMLEAAGSGHPGGSLSAVEIVTALYFEVMRHDPQNPQWPDRDRLILSKGHACPVVYAAL
AEAGYFPKEELLTLRKFGSRLQGHPDRKKLPGLEASTGSLGQGLSIAAGIALGFKMDGKRNDVYCLMGDGELNEGQIWEA
AMTASHYKLDNLCGIVDHNCLQIDGWTCEVKNMEPLVDKWKAFGWNVLEVDGHNIEEVVAAFRRFKHTHFKPTVIIAHTI
KGKGVSFMEDNAAWHGKAPNREQAALALEELCGGCC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96177.1 transketolase Not tested T-PAI Protein 2e-41 45
unnamed AAT96117.1 transketolase Not tested T-PAI Protein 9e-42 45
unnamed AAT96229.1 transketolase Not tested T-PAI Protein 8e-42 45
unnamed AAT96056.1 transketolase Not tested T-PAI Protein 3e-42 45
unnamed AAT96100.1 transketolase Not tested T-PAI Protein 2e-41 44