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Name : Tlie_1682 (Tlie_1682) Accession : YP_004933501.1 Strain : Thermovirga lienii DSM 17291 Genome accession: NC_016148 Putative virulence/resistance : Unknown Product : cold-shock DNA-binding protein family Function : - COG functional category : K : Transcription COG ID : COG1278 EC number : - Position : 1750630 - 1750827 bp Length : 198 bp Strand : - Note : PFAM: 'Cold-shock' DNA-binding domain; COGs: COG1278 Cold shock protein; InterPro IPR002059: IPR019844: IPR012156: IPR011129; KEGG: aco:Amico_0349 cold-shock DNA-binding domain protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; SPTR DNA sequence : ATGCAAGGAACAGTCAAGTGGTTCAACGAGTCTAAGGGTTATGGGTTCATCACGAGCGACGAAGGAAACGACGTATTTGT TCATTTCAGCGCGATCCAGATGGATGGCTTTAAGACCCTTAGCGAAGGTCAGAGGGTTGAGTTTGAGGTAGTCCAGGGGG AAAAGGGTCCGCAGGCGGCGAATGTACATAGGGTTTAA Protein sequence : MQGTVKWFNESKGYGFITSDEGNDVFVHFSAIQMDGFKTLSEGQRVEFEVVQGEKGPQAANVHRV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAO18076.1 | unknown | Not tested | TTSS locus | Protein | 1e-14 | 61 |
| cspH | YP_216241.1 | cold shock protein-like protein | Not tested | SPI-11 | Protein | 1e-04 | 43 |
