Gene Information

Name : Tlie_0194 (Tlie_0194)
Accession : YP_004932035.1
Strain : Thermovirga lienii DSM 17291
Genome accession: NC_016148
Putative virulence/resistance : Virulence
Product : microcompartments protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 208679 - 208957 bp
Length : 279 bp
Strand : +
Note : PFAM: BMC domain; COGs: COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein; InterPro IPR020808: IPR000249; KEGG: tex:Teth514_1955 microcompartments protein; PFAM: microcompartments protein; SPTR: Microcompartments protein

DNA sequence : 
ATGAACGGAGAAGCTTTGGGTTTGATTGAGACCAGAGGGTTAGTGGGTTGTATCGAGGCTGCAGATGCCATGGTGAAAGC
CGCAAACGTTAGACTGGTCGGCTACGAGAAGATTGGCTCTGGTTACGTCACCGTGATGGTCAGGGGAGATGTTGGAGCTG
TAAAGGCCGCAGTTGACGCGGGACTTGCTGCAGCCAAAAAGGTTGGAGAAGTTGTTTCTGTACATGTAATCCCAAGGCCG
CATTCTGACACGGAAAAGATCCTTCCCAAGTTGGACTAA

Protein sequence : 
MNGEALGLIETRGLVGCIEAADAMVKAANVRLVGYEKIGSGYVTVMVRGDVGAVKAAVDAGLAAAKKVGEVVSVHVIPRP
HSDTEKILPKLD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 1e-15 71
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 1e-15 70
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 2e-15 69

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tlie_0194 YP_004932035.1 microcompartments protein VFG1596 Protein 5e-16 71
Tlie_0194 YP_004932035.1 microcompartments protein VFG1598 Protein 5e-16 70
Tlie_0194 YP_004932035.1 microcompartments protein VFG1597 Protein 8e-16 69