Gene Information

Name : Tlie_0202 (Tlie_0202)
Accession : YP_004932043.1
Strain : Thermovirga lienii DSM 17291
Genome accession: NC_016148
Putative virulence/resistance : Virulence
Product : microcompartments protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 215802 - 216119 bp
Length : 318 bp
Strand : +
Note : PFAM: BMC domain; COGs: COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein; InterPro IPR000249; KEGG: tjr:TherJR_0624 microcompartments protein; PFAM: microcompartments protein; SPTR: Ribonuclease III

DNA sequence : 
ATGAAGGGAGAAGCTTTAGGTTTGTTGGAGACAAAAGGTTTTGTGGGAGCTATAGAGGCGGCAGATGCAATGGTAAAGGC
TGCTAACGTGACCTTGATAGGGCACAAGCTTTCCGGCGCAGGGTTGGTGACAGTGATGATAAGGGGAGATGTGGGGGCAG
TGAAAGCTGCAGTGGATGCTGGGGCAGCAGCTGCTAAGGCAGTTGGCGAGGTTGTTTCTGTACACGTCATCCCAAGACCC
CACACTGATACAGAGACCATGTTGCCTGAGGGAGAAAAAGACAACAAGGCAGATTTGAACATAGGGGTAGAAGACTAG

Protein sequence : 
MKGEALGLLETKGFVGAIEAADAMVKAANVTLIGHKLSGAGLVTVMIRGDVGAVKAAVDAGAAAAKAVGEVVSVHVIPRP
HTDTETMLPEGEKDNKADLNIGVED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 6e-12 64
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 1e-11 62
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 4e-11 61

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tlie_0202 YP_004932043.1 microcompartments protein VFG1596 Protein 2e-12 64
Tlie_0202 YP_004932043.1 microcompartments protein VFG1597 Protein 6e-12 62
Tlie_0202 YP_004932043.1 microcompartments protein VFG1598 Protein 2e-11 61