Gene Information

Name : Tlie_R0001 (Tlie_R0001)
Accession : -
Strain : Thermovirga lienii DSM 17291
Genome accession: NC_016148
Putative virulence/resistance : Unknown
Product : 16S ribosomal RNA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 442271 - 443789 bp
Length : 1519 bp
Strand : +
Note : -

DNA sequence : 
AGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAACACATGCAAGTCGGACGGGGTGAGTTAGTGGAAGCT
TTCGGGTTGAAGCTGACTTACCTAGTGGCGGACGGGTGAGTAACGCGTGAATTACCTACCCTAGGGAGGGGGATAACGCC
TGGAAACGGGTGCTAATACCCCATAGGCCGGGAGGTTAAAGGGAGGAATCTGCCCTAGGATGGGTTCGCGTCCTATCAGC
TAGTTGGTGGGGTAATGGCCTACCAAGGCGAAGACGGGTAGCCGGTCTGAGAGGATGTACGGCCACACTGGAACTGAGAC
ACGGTCCAGACTCCTACGGGAGGCAGCAGTGGGGAATATTGGGCAATGGGCGCAAGCCTGACCCAGCGACGCCGCGTGAG
GGAAGAAGGCCTTTGGGTTGTAAACCTCTGTTGTACGGGAAGAAGGCAGTGACGGTACCGTACGAGGAAGCCCCGGCAAA
CTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCGAGCGTTGTCCGGAATTACTGGGCGTAAAGGGCGCGCAGGCGGAT
ATGCAAGTCTGCTGTGTAATGTCACGGCTCAACCGTGTCATTGCGGTGGAAACTGCATATCTGGAGTACTGGAGAGGGGA
GTGGAATTCCCGGTGTAGCGGTGAAATGCGTAGATATCGGGAGGAACACCAGTGGCGAAGGCGGCTCTCTGGCCAGTTAC
TGACGCTCATGCGCGAAAGCTGGGGGAGCGAACCGGATTAGATACCCGGGTAGTCCCAGCCGTAAACGATGAATGCTAGG
TGTGGGTGTCGTAGGGCATCTGTGCCGCAGTTAACGCGATAAGCATTCCGCCTGGGGAGTACGGTCGCAAGATTGAAACT
CAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCACGTGGTTTAATTCGATGCAAACCGAAGAACCTTACCTGGGTT
TGACATGTACGTGGTACTGACCTGAAAGGGGAGGGACCCATACTTCGGTATGGGAGCGTACACAGGTGCTGCATGGCTGT
CGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCCTGCATCTAGTTGCCAACGGGTGAAGCT
GGGCACTCTAGATGGACTGCCGGCGACAAGCCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTATGTCCAGG
GCGACACACGTGCTACAATGGCCGGTACAGCGGGAAGCGAAGGGGAGACCTGGAGCGGATCTCTGAAAGCCGGTCCCAGT
TCGGATTGTAGTCTGCAACTCGACTACATGAAGCTGGAATCGCTAGTAATCGCGGATCAGCCAAGCCGCGGTGAATACGT
TCCCGGGCCTTGTACACACCGCCCGTCACACCACCCGAGTTGGGTGCACCCGAAGCCGGTGGCCTAACCCTTAAGGGGAG
GAGCCGTCGAAGGTGTGCCTGGTAAGGGGGGTGAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGATCACCT

Protein sequence : 
-

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
FTT_r07 - 16S ribosomal RNA Not tested FPI DNA 1e-98 86
FTT_r10 - 16S ribosomal RNA Not tested FPI DNA 1e-98 86
FTM_1085 - 16S ribosomal RNA Not tested FPI DNA 1e-98 86
FTM_1695 - 16S ribosomal RNA Not tested FPI DNA 1e-98 86
FTW_2069 - 16S ribosomal RNA Not tested FPI DNA 1e-98 85.8
FTW_2070 - 16S ribosomal RNA Not tested FPI DNA 1e-98 85.8