Gene Information

Name : Tlie_0518 (Tlie_0518)
Accession : YP_004932350.1
Strain : Thermovirga lienii DSM 17291
Genome accession: NC_016148
Putative virulence/resistance : Unknown
Product : FeS cluster assembly scaffold protein NifU
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG0822
EC number : -
Position : 557854 - 558231 bp
Length : 378 bp
Strand : +
Note : PFAM: NifU-like N terminal domain; TIGRFAM: SUF system FeS assembly protein, NifU family; FeS cluster assembly scaffold protein NifU, Clostridium type; COGs: COG0822 NifU homolog involved in Fe-S cluster formation; InterPro IPR002871: IPR017787; KEGG: tai

DNA sequence :
ATGTATTCTGAAAAGGTTATGGAACTTTTTATGCATCCCAAAAATGCTGGCAAGATAGAGGATGCCGATGGAATAGGTCA
GGTTGGTAACCCCCAGTGTGGGGACATAATGAAGATCTATATCAAGGTGGAAAACGATGTAATAACGGACATAAAGTTCG
AGACCTTTGGGTGCGCTTCAGCTATAGCTTCCAGCTCCATGGTTACCGAGATGGTTAAAGGAAAGACCTTAGATGAGGCC
CTTAAGATAACGAACAAGGATGTTCTAGAGGAACTAGGCGGTCTGCCCCCTCAGAAGATCCACTGTTCCCTTCTTGCTGA
GGAAGGCATCAAGGCTGCAATTGAGGATTACAGGAGGCGCAAGGAGGGTAAAAAATGA

Protein sequence :
MYSEKVMELFMHPKNAGKIEDADGIGQVGNPQCGDIMKIYIKVENDVITDIKFETFGCASAIASSSMVTEMVKGKTLDEA
LKITNKDVLEELGGLPPQKIHCSLLAEEGIKAAIEDYRRRKEGKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iscU AAT96059.1 IscU Not tested T-PAI Protein 7e-28 58