Gene Information

Name : FCOL_13185 (FCOL_13185)
Accession : YP_004943225.1
Strain : Flavobacterium columnare ATCC 49512
Genome accession: NC_016510
Putative virulence/resistance : Unknown
Product : ribonuclease HI
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3083341 - 3083820 bp
Length : 480 bp
Strand : -
Note : COG0328 Ribonuclease HI

DNA sequence :
ATGTCATACCAAGTACATATTTATACTGATGGAGCAGCAAAAGGAAATCCTGGACCTGGCGGCTATGGCTTGGTAATGGA
ACTGGTTGGAAGTTCTTATAAAAAAGAATTTTACGAAGGCTTTCGATTGACTACCAACAACCGAATGGAACTTTTAGCGG
TCATTGTAGGGCTCGAAAAACTAAAACAACCCAATCAGCGTGTACTTGTCGTTTCTGATTCAAAATATGTAGTAGATGCT
GTTGAAAAAAATTGGGTAATAGGCTGGGAAAAAACAGGTTTTAAAGGCAAAAAAAACCCAGATTTATGGGTTCGCTTTTT
AAAAGTATACCGCCAACATCAAGTAGATTTTAAATGGATAAAAGGTCATAACAATCACCCACAAAATGAACGTTGTGATC
AACTAGCGGTAATGGCATCGCAACTGAAAACACTCTCTATCGATCGTTTTTATGAAGGAGAAAGTAATAAATTAGTTTGA

Protein sequence :
MSYQVHIYTDGAAKGNPGPGGYGLVMELVGSSYKKEFYEGFRLTTNNRMELLAVIVGLEKLKQPNQRVLVVSDSKYVVDA
VEKNWVIGWEKTGFKGKKNPDLWVRFLKVYRQHQVDFKWIKGHNNHPQNERCDQLAVMASQLKTLSIDRFYEGESNKLV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rnhA AAO17224.1 RnhA Not tested tcd island Protein 5e-24 44