Gene Information

Name : Desor_5406 (Desor_5406)
Accession : YP_004973297.1
Strain : Desulfosporosinus orientis DSM 765
Genome accession: NC_016584
Putative virulence/resistance : Virulence
Product : carbon dioxide concentrating mechanism/carboxysome shell protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5629874 - 5630164 bp
Length : 291 bp
Strand : -
Note : PFAM: BMC domain

DNA sequence :
ATGAACAGATCAGATGCTTTAGGATTAATCGAAACCAGAGGTATGGTTGGAGCTATTGAAGCAGCAGACGCTATGGTGAA
GGCAGCTAATGTACAGCTTATGGGTTATGAAAAAGTCGGCGGTGCCCTGGTAACCGTTATGGTAAGAGGAGACGTTGGAG
CAGTCAAAGCTGCTACTGATGCCGGTGCTGCTGCAGCTCAGCGGGTTGGTGAACTTATTTCCGTTCACGTTATTCCCCGC
CCCCACGGTGATGTAGAAATGATGCTCCCCGGCGGTAAGAAAGACGCTTAA

Protein sequence :
MNRSDALGLIETRGMVGAIEAADAMVKAANVQLMGYEKVGGALVTVMVRGDVGAVKAATDAGAAAAQRVGELISVHVIPR
PHGDVEMMLPGGKKDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 9e-17 65
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 1e-16 64
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 1e-15 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desor_5406 YP_004973297.1 carbon dioxide concentrating mechanism/carboxysome shell protein VFG1596 Protein 4e-17 65
Desor_5406 YP_004973297.1 carbon dioxide concentrating mechanism/carboxysome shell protein VFG1597 Protein 5e-17 64
Desor_5406 YP_004973297.1 carbon dioxide concentrating mechanism/carboxysome shell protein VFG1598 Protein 5e-16 60