Gene Information

Name : Desor_5423 (Desor_5423)
Accession : YP_004973313.1
Strain : Desulfosporosinus orientis DSM 765
Genome accession: NC_016584
Putative virulence/resistance : Virulence
Product : carbon dioxide concentrating mechanism/carboxysome shell protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5644418 - 5644708 bp
Length : 291 bp
Strand : -
Note : PFAM: BMC domain

DNA sequence : 
GTGGACACAAATGGTGCCTTAGGGTTCATAGAAACGTATGGCCTGGTTTCGGTGCTGGAAGCAGCAGATGCCATGTGCAA
AGCTGCGGATGTAGAATTGGTCGGCTATGAAAATGTAGCTTCGGGCTTGATTTCTGTGGTTATACGCGGCGATGTGGGAG
CGGTCAAAGCTGCAGTAGAAGCCGGAGTCAGAGAAGCCAGCAAAGTAGGAAAAATCTACTGTTCCAATGTTATAGCCAGG
CCCCATGCGGACGTAGAAAAAATCATTGCGCGATACGTTTTAGATTGGTAA

Protein sequence : 
MDTNGALGFIETYGLVSVLEAADAMCKAADVELVGYENVASGLISVVIRGDVGAVKAAVEAGVREASKVGKIYCSNVIAR
PHADVEKIIARYVLDW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 1e-16 64
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 1e-16 63
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 2e-15 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desor_5423 YP_004973313.1 carbon dioxide concentrating mechanism/carboxysome shell protein VFG1597 Protein 4e-17 64
Desor_5423 YP_004973313.1 carbon dioxide concentrating mechanism/carboxysome shell protein VFG1596 Protein 6e-17 63
Desor_5423 YP_004973313.1 carbon dioxide concentrating mechanism/carboxysome shell protein VFG1598 Protein 9e-16 58