Gene Information

Name : Desor_5424 (Desor_5424)
Accession : YP_004973314.1
Strain : Desulfosporosinus orientis DSM 765
Genome accession: NC_016584
Putative virulence/resistance : Virulence
Product : carbon dioxide concentrating mechanism/carboxysome shell protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5644739 - 5645038 bp
Length : 300 bp
Strand : -
Note : PFAM: BMC domain

DNA sequence : 
ATGAAATACTATGGTGAAGAGGCTTTAGGCCTGGTAGAAACAAGAGGGATGGTCCCGGCAATTCAAGCTGCAGATGTCAT
GTGTAAAACTGCAGATGTTGTCCTTGTTTCTTATGAAAATGTCGGTTCCGGGCTCGTGACGGTGATGGTTAAGGGTGATG
TAGCAGCGGTTAGATCGGCTGTGGAAAGCGGTGCAGTCGCAGCGGCAGCGATTGGTGAAGTTACTGCTTACCATGTTATG
CCCAGGCCTGTGAGCCGGGTAGGGAAAATTGTTACGGCACATGACATTGATGCAGAGTAA

Protein sequence : 
MKYYGEEALGLVETRGMVPAIQAADVMCKTADVVLVSYENVGSGLVTVMVKGDVAAVRSAVESGAVAAAAIGEVTAYHVM
PRPVSRVGKIVTAHDIDAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 7e-14 61
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 8e-13 60
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 3e-13 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desor_5424 YP_004973314.1 carbon dioxide concentrating mechanism/carboxysome shell protein VFG1596 Protein 3e-14 61
Desor_5424 YP_004973314.1 carbon dioxide concentrating mechanism/carboxysome shell protein VFG1597 Protein 3e-13 60
Desor_5424 YP_004973314.1 carbon dioxide concentrating mechanism/carboxysome shell protein VFG1598 Protein 1e-13 58