Gene Information

Name : AZOLI_p40604 (AZOLI_p40604)
Accession : YP_004975541.1
Strain :
Genome accession: NC_016587
Putative virulence/resistance : Virulence
Product : Type I secretion ABC transporter, ATPase and permease components
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 574543 - 576705 bp
Length : 2163 bp
Strand : +
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 8181764; Product type t : transporter

DNA sequence :
ATGCCACGTCTGGTGGAAGACAGCGTGATTCCGGATACCGGACTGTCATGCCTGACCCTCATGCTACGCCTCATGGGCCA
TCCCGCCGATCCGGAGCAGCTCCGCCATGATCAGGCTGCCCGCGGCCGGGCGATGGAGACGCTTGACATCCTGCGCGCGG
CGAAGCGATTCGGCCTGAAGGCGCGATCCGTCACCACCCGCTGGGAACGGCTGGCCGCCACGCCGCTGCCGGCGATCGCC
AGACGGCGCGACGGCCGTTACTTCATCATCGCCAAGATCGACGGCGACCGCGCGCTGATCCAGGACCCGCTGGAATCGAA
GCCGCTGGCGCTGCCGCGCGCGGTGGTCGAGCCGGCATGGTCGGGCGAACTGGTGCTGATGGCGCGCCGCGCCGGCCTGG
ATCTGGCGCAGGTGCGCTTCGGCATCGGCTGGTTCGTGCCGGCCCTGCTGAAATACCGGCACCTGTTTTCGGAAATCCTG
ATCGCCTCCTTCATGTTGCAGGTGTTCGGGCTGATCAGTCCGCTGTTCTTCCAGGTCGTCGTCGACAAGGTGCTGGCCCA
CCGCAGCCTGACCACGCTGGACATCCTGACCATCGGGCTGGTGGTGGTGTCGCTGTTCGAGACGGTGCTGGGCGGGTTGC
GCAGCTATCTGTTCTCGCACACCACCAGCCGGGTCGACGTGACTCTGGGCGCTCGGCTGTTCGACCATCTGCTGGCGCTG
CCGCTGCCCTATTTCCAGGCGCGCCGGGTCGGCGACAACGTGGCGCGGGTGCGCGAACTGGACCGCATCCGCGATTTCCT
GACCGGATCGGCGCTGACGCTGGTCATCGATCTGGTCTTCACCGTCGTCTTCCTGGCGGTGATGTGGTGGTACAGCCCGG
CGCTGACCGGCATCGTGCTGGCGTCGCTGCCGGTCTATGCCGCGATCAGCCTTGCCGTCACCCCGATCCTGCGGCGGCGG
CTGGAGGCGAAATTCGCCCTGGGGGCGGAGAACCAGGCCTTCCTGGTCGAGAGCATTTCCGGCATCGAAACGCTGAAGGC
GATGGCGGTGGAACCGGAGATGCGCCGCCATTGGGAGGAGAAGCTGGCCGCCTATGTCGGCGCCGCCTTCCGCGCGTCCA
GCCTGGGCGTGGTCGCCGGCCAGGCCGTCCAGCTCGTCAGCAAGCTGACCCTGGCGGCCCTGCTCTATGTCGGCGCGCAG
GAGGTGATCGCCGGCGCGCTGACCATCGGCGCGCTGGTGGCGGTGAACATGCTGGCGGGCCGGGTGTCGTCGCCGGTGCT
GCGGCTGGCGCAGCTGTGGAACGACTTCCAGCAGGCGCGCGTCTCGGTCGAGAGGCTGGCCGACATCCTCAACACCACGC
CGGAACCGGCGGCGAAACCCGGCCGCCTGCCGCTGCCCGCCATCCGCGGCCGCATCCGCTTCGACCGGGTGGGATTCCGC
TATCGCCCCGACGCCTCCCCGACGCTCCAGGGCATCGACCTGACGGTGGAGGCGGGGGAGACGGTCGGCATCGTCGGCTC
GTCCGGCTCGGGAAAGAGCACGCTGACCAAGCTGGTGCAGCGGCTCTATGTGCCGGAGACCGGCCGCGTTCTGATCGACG
ACGTGGACCTGTCGCTGGTGGACGTGGCGTGGCTGCGGCGCCAGATCGGCGTCGTCCTGCAGGAGAACGTGCTGTTCAAC
CGCTCCATCCGCGACAACATCGCGCTGGCCGATCCCGGCATGCCGATGGAGCGGATCGTCGAGGCGGCGCGGCTGGCCGG
GGCGGACCGCTTCATCCTGGGCCTGCCCGAAGGCTACGACACGGTGATCGGCGAGCGTGGCGCCAGCCTGTCGGGCGGAC
AGCGCCAGCGCGTCGCCATCGCCCGCGCGCTGGCCACCGACCCGCGCATCCTGATCTTCGACGAGGCGACCAGCGCGCTC
GACGTCGAGAGCGAGGCGGCGATCCAGGCCAACATGCGCCGCATCTGCGACAACCGCACGGTTCTGATCGTCGCCCACCG
CCTGTCCACCGTGCGCGGCTGCGACCGCATCGTCACGGTGGAAGAGGGGCGGATCGCCGAACAGGGCACCCATGACGACC
TGATCCGGCTCGGCGGGCGCTATGCGGCGCTGTGGCGGATGCAGGCGGGCAGACAGGCGGAGGCCGATCATGGCGTCGCT
TGA

Protein sequence :
MPRLVEDSVIPDTGLSCLTLMLRLMGHPADPEQLRHDQAARGRAMETLDILRAAKRFGLKARSVTTRWERLAATPLPAIA
RRRDGRYFIIAKIDGDRALIQDPLESKPLALPRAVVEPAWSGELVLMARRAGLDLAQVRFGIGWFVPALLKYRHLFSEIL
IASFMLQVFGLISPLFFQVVVDKVLAHRSLTTLDILTIGLVVVSLFETVLGGLRSYLFSHTTSRVDVTLGARLFDHLLAL
PLPYFQARRVGDNVARVRELDRIRDFLTGSALTLVIDLVFTVVFLAVMWWYSPALTGIVLASLPVYAAISLAVTPILRRR
LEAKFALGAENQAFLVESISGIETLKAMAVEPEMRRHWEEKLAAYVGAAFRASSLGVVAGQAVQLVSKLTLAALLYVGAQ
EVIAGALTIGALVAVNMLAGRVSSPVLRLAQLWNDFQQARVSVERLADILNTTPEPAAKPGRLPLPAIRGRIRFDRVGFR
YRPDASPTLQGIDLTVEAGETVGIVGSSGSGKSTLTKLVQRLYVPETGRVLIDDVDLSLVDVAWLRRQIGVVLQENVLFN
RSIRDNIALADPGMPMERIVEAARLAGADRFILGLPEGYDTVIGERGASLSGGQRQRVAIARALATDPRILIFDEATSAL
DVESEAAIQANMRRICDNRTVLIVAHRLSTVRGCDRIVTVEEGRIAEQGTHDDLIRLGGRYAALWRMQAGRQAEADHGVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hlyB NP_755448.1 hemolysin B Virulence PAI I CFT073 Protein 7e-172 53
hlyB CAD33760.1 hemolysin B Virulence PAI I 536 Protein 5e-172 53
hlyB CAD42038.1 HlyB protein Virulence PAI II 536 Protein 5e-172 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AZOLI_p40604 YP_004975541.1 Type I secretion ABC transporter, ATPase and permease components VFG1269 Protein 1e-173 55
AZOLI_p40604 YP_004975541.1 Type I secretion ABC transporter, ATPase and permease components VFG0841 Protein 1e-164 53
AZOLI_p40604 YP_004975541.1 Type I secretion ABC transporter, ATPase and permease components VFG1501 Protein 3e-172 53
AZOLI_p40604 YP_004975541.1 Type I secretion ABC transporter, ATPase and permease components VFG0907 Protein 3e-172 53
AZOLI_p40604 YP_004975541.1 Type I secretion ABC transporter, ATPase and permease components VFG1557 Protein 3e-172 53