Gene Information

Name : evpB (BYI23_C010230)
Accession : YP_004979607.1
Strain :
Genome accession: NC_016590
Putative virulence/resistance : Virulence
Product : type VI secretion protein, EvpB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1200236 - 1201789 bp
Length : 1554 bp
Strand : -
Note : -

DNA sequence :
ATGAACAAGAAAGAAGCCCGCGCGAGCGCCGCTGGCGAGACCGTCGTGCTCGACGCCCCGCAAGCGTCACAGGGTGACAG
CGTCTACGCAGCCCTTTGCGACAAGATCAACCTGAGCCCGGTGTCGCAGGCGCGCCCGCTCGAAGCATTCCGTGACAACG
ACATGCTCTCCGAAGCCTCCGCCGACGAGCGCCTGGCACGCGGCATGGGCGCGTTCCTCGATCTCGTCGCGCAGACGAGC
AAGCCGGTGGATCGTCTCGACAAGTCATTGCTGGATTTCTTCATCGGTCAACTGGACCGGCAGATCAGCCGCCAGCTCGA
TTCGGTCATGCACAATCCCGAATTTCAGGCGCTGGAAGGCCGCTGGCGTGGCCTGAAGATGCTCGTATCGCGCACGGATT
TCCGCAAGAACGCGCGTATCGAGGTGCTCGACGTCTCGAAGGACGCGCTCGTGCGCGACTTCGAGGACGCGCCGGAACTG
ATTCAGAGCGGGCTGTATCGCCTCACTTATATCGAGGAATACGACACGCCGGGCGGCCAGCCGATCAGCGCGATGATCAG
CGACTTCGAATTCGCGAACTCGCCGCAGGACGTGGCCTTGCTGCGCAACATCTCGAAGGTTGCGGCGGCGGCGCATATGC
CGTTCATCGGTTCGGTGGGCGCGGCCTTCTTCGGCAAGAAGTCGATGGAGGAAGTCGCGGCCATTCAGGATATCGGCAAC
TATTTCGATCGCGCCGAATACATCAAGTGGAAGAGCTTCCGCGACACGGACGACTCGCGTTACGTCGGTCTCGTGATGCC
GCGCGTGCTGGGCCGCCTGCCCTACGGCAAGGACACGACGCCCGTGCGCGCGTTCAACTACGAGGAGCAGGTGAAGGGCC
CGGACCACGATCGCTATCTGTGGGTGAATGCGTCGTTTGCGTTCGCGGCGAACATGACGCGCAGCTTCGTGAACAACGGC
TGGTGCGTGCAGATTCGCGGCCCGCAGGCGGGCGGCAAGGTGGAAGACCTGCCGGTGCATCTGTACGACCTCGGCACCGG
CGTGCAGCCGAAGATTCCGACCGAAGTGCTGATTCCCGAGACGCGCGAGTTCGAGTTCGCCAACCTCGGCTTCATTCCGC
TCTCGTTCTACAAGAACCACGATTTCGCGTGCTTCTTCTCGGCGAACTCGTCGCAAAAGCCCGCGCTCTACGAGACCAAG
GAAGCGACGGCGAATAGCCGCATCAACGCGCGTCTGCCGTACATCTTCCTGCTGTCGCGCATTGCGCATTACCTGAAGCT
GATTCAGCGCGAGAACATCGGCACGACCAAGGACCGTCGTCTGCTGGAGCTCGAACTGAACAACTGGATCAAGGGCCTCG
TCACCGAGATGAAGGACCCGGGCGACGAACTGCAGGCGTCGCATCCGCTGCGCGAGGCGAAGGTGATGGTCGAAGACATC
GAGGACAACCCCGGCTTCTTCCGCATCAAGCTGTTCATCGTGCCGCACTTCCAGGTGGAAGGGATGGATATCGGCCTGTC
GCTGGTGTCGCAGATGCCGAAGGCGAAGAGCTGA

Protein sequence :
MNKKEARASAAGETVVLDAPQASQGDSVYAALCDKINLSPVSQARPLEAFRDNDMLSEASADERLARGMGAFLDLVAQTS
KPVDRLDKSLLDFFIGQLDRQISRQLDSVMHNPEFQALEGRWRGLKMLVSRTDFRKNARIEVLDVSKDALVRDFEDAPEL
IQSGLYRLTYIEEYDTPGGQPISAMISDFEFANSPQDVALLRNISKVAAAAHMPFIGSVGAAFFGKKSMEEVAAIQDIGN
YFDRAEYIKWKSFRDTDDSRYVGLVMPRVLGRLPYGKDTTPVRAFNYEEQVKGPDHDRYLWVNASFAFAANMTRSFVNNG
WCVQIRGPQAGGKVEDLPVHLYDLGTGVQPKIPTEVLIPETREFEFANLGFIPLSFYKNHDFACFFSANSSQKPALYETK
EATANSRINARLPYIFLLSRIAHYLKLIQRENIGTTKDRRLLELELNNWIKGLVTEMKDPGDELQASHPLREAKVMVEDI
EDNPGFFRIKLFIVPHFQVEGMDIGLSLVSQMPKAKS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec18 AAQ96712.1 Aec18 Not tested AGI-1 Protein 9e-102 44
aec18 YP_851426.1 hypothetical protein Not tested PAI II APEC-O1 Protein 1e-101 44
HH0247 NP_859778.1 hypothetical protein Not tested HHGI1 Protein 6e-98 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
evpB YP_004979607.1 type VI secretion protein, EvpB VFG2475 Protein 1e-114 46
evpB YP_004979607.1 type VI secretion protein, EvpB VFG2093 Protein 5e-110 46
evpB YP_004979607.1 type VI secretion protein, EvpB VFG2070 Protein 8e-87 42