Gene Information

Name : BYI23_C003660 (BYI23_C003660)
Accession : YP_004978950.1
Strain :
Genome accession: NC_016590
Putative virulence/resistance : Virulence
Product : chaperone
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 420731 - 423340 bp
Length : 2610 bp
Strand : +
Note : -

DNA sequence :
ATGGCAGACATCAGCCGTGCCGTCATGTTCGGCAAACTCGACACGCTCAGCTTCCGCGCGATGGAAAGCGCCACGACGTT
CTGCCGTCTGCGCGGCAATCCGTATGTGGAGGTTGTGCACTGGCTGCATCAGGTACTGCAGTTGCCGGATTCCGATCTGC
ATCGCGTGATCCGCCATGCGGACATCGATCCAGCGGTGCTCGCGCGCGATCTGACCGATGCGCTGGACCGTCTGCCGCGC
GGCGCATCGTCGGTGACGGATATCGGCGCACAACTCGAAGAAGCGGTGGAGCGCGGCTGGGTGCATGCATCGCTGATGTT
CGAGGCGCACACGATACGCAGCGTGCATGTGCTCGTCGGCATGTTGCGGACGCCCGCGCTGCGCAACGTGTTGCGCGGCA
TCTCGCGCGAGTTCGACCGCGTGAAGGCGGACGAACTCGTCGAGCGCCATGCCGATCTCTTCGACGGCTCGCCCGAAACG
CAGGCGCAGACAGCGCCCGCGCCGCAGCCGCCGGCGGACGCGGGCGCGCCTCGGACGAACGACGCGCTGCAACGCTTCAC
CGTCGATCTGACCGAGGACGCGCGCTCGGGCAAGCTCGATCCGATCGTCGGCCGGGACGAGGAAATCCGCCAGGTCGTCG
ACATTCTCATGCGCCGCCGCCAGAACAACCCGATTCTCACGGGCGAGGCCGGCGTCGGCAAGACGGCGGTCGTGGAAGGG
CTTGCGTTGCGCATCGTCGCGGGCGATGTGCCGCCCGCCTTGCGGCACGTGAGCCTGCGCACGCTCGACGTGGCATTGCT
GCAGGCGGGCGCGGGCATGAAAGGCGAGTTCGAGACGCGTCTGCGTCAGGTGCTGGATGCGGTGCAGTCCGCGGAGAAGC
CGGTGATCCTCTTCATCGACGAGGCGCACACGCTGATCGGCGCGGGCGGGGCGGCGGGCACCGGTGACGCGGCGAATCTG
CTCAAGCCGGCGCTGGCACGCGGCGCCGTGCGCATGATCGCGGCCACGACGTGGTCCGAATACCGGCGGCACATCGAGAA
GGACCCCGCCCTCACGCGGCGTTTTCAGGTCGTGCAGGTGCATGAGCCCGACGAGACGCGCGCGGTGACGATGATGCGCG
GCATCGCCGCTGCGCTCGAGGCGCATCACGGCGTGCAGATCCTGGACGAAGCCGTCGAGGCGGCGGTGAGGCTTTCGCAT
CGCTATCTGCCGGCGCGCCAGTTGCCCGACAAGTCGGTGAGCCTGCTCGACACCGCCTGCGCGCGGGTCGCCGTGAGCCA
GCATGCGACACCGCCCGCCGTCGACGATGCAAGGCGGCGCATCGAGACGCTCATGACCGAACTCGACGTCATCGCGCGCG
AGGCCGCCATCGGCATCGATACCGCGACACGGCACGAAGCGGCATCCGCGGACCTGCAGCTTGCCAACGCGCATCTGGCG
GCCCTCGAAGCGCGCTGGCACGCCGAGCGCGGCATGGTCGAGGACATCCTCGCGCGCCGCCGCGCGTTGCGCGAACACGC
GCCCGACACCGATCTGAACGCGCTGCGCGAACGTCAGGCGCAACTCGCCCTGCATCAGGGCGAAGCGCCGCTGATCCTGC
CCGGCGTGGATCGTCACGCGGTCGCGGCGGTCGTTCAGGACTGGACCGGCGTGCCCGTGCTCAACATGCTGAAGAACGAG
GTCGGCAATGTCCTGCGTCTCGACGAACTGCTCGACAGGCGCATCATCGGGCAGCACCACGCCACGCGCATGATCGCGCG
CCGCGTGCAGACCTCGCGCGCGGGCCTCGACGATCCGAACAAGCCCGTCGGCGTGTTTCTGCTGGCCGGAACCTCGGGCG
TCGGCAAGACGGAGACGGCGCTCGCGCTCGCGGAGGCGCTCTATGGCGGCGAGCAGAATCTCATCACCATCAACATGAGC
GAGTATCAGGAGGCGCATACCGTGTCGCTCCTGAAGGGCGCGCCGCCGGGCTATGTCGGATTCGGCGAGGGTGGCGTGCT
GACCGAGGCGGTGCGCCGCCGTCCGCATAGTGTCGTGCTGCTCGACGAAGTCGAGAAGGCCCATCCGGATGTGCACGAAC
TGTTCTTCCAGGTCTTCGACAAGGGCCGCATGGACGACAGCGAAGGGCGTTCCATCGATTTCCGCAACACGCTGATCCTG
CTGACCACCAACGCGGGCACCGACTGTATCGCGGAACTGTGCACCGGCCCGCGGGCGCCCGCGCCGATGGAGGTGATCGA
GCGGGAACTGCATGCGCAACTGCTGCAGACGTTTCCGCCCGCGCTGCTCGGGCGCATGGTGACGATTCCGTATTACCCGC
TTTCCGGCGACATGCTGCGCGCGATCATCCGGCTGCAACTCGGGCGCGTGGCGGAGCGGGTGACGAGCACGCATCGTGTG
CCGTTCACTTACGACGATGACGTCGTCGCGCAGATCGCGCTGCGCTGTACGCGGCTGGAAAGCGGCGGCCGCATGATCGA
CGCGATCCTCACCAACAGCGTGCTGCCGCGCATCAGTACGGAGTATCTGTCGCGCGTGATGGCGGGCACGGCCCTTTCGC
GCGTGCATGTGGGCGTCGAGGACGAGGAGTTCACGTATGCCTTCGACTGA

Protein sequence :
MADISRAVMFGKLDTLSFRAMESATTFCRLRGNPYVEVVHWLHQVLQLPDSDLHRVIRHADIDPAVLARDLTDALDRLPR
GASSVTDIGAQLEEAVERGWVHASLMFEAHTIRSVHVLVGMLRTPALRNVLRGISREFDRVKADELVERHADLFDGSPET
QAQTAPAPQPPADAGAPRTNDALQRFTVDLTEDARSGKLDPIVGRDEEIRQVVDILMRRRQNNPILTGEAGVGKTAVVEG
LALRIVAGDVPPALRHVSLRTLDVALLQAGAGMKGEFETRLRQVLDAVQSAEKPVILFIDEAHTLIGAGGAAGTGDAANL
LKPALARGAVRMIAATTWSEYRRHIEKDPALTRRFQVVQVHEPDETRAVTMMRGIAAALEAHHGVQILDEAVEAAVRLSH
RYLPARQLPDKSVSLLDTACARVAVSQHATPPAVDDARRRIETLMTELDVIAREAAIGIDTATRHEAASADLQLANAHLA
ALEARWHAERGMVEDILARRRALREHAPDTDLNALRERQAQLALHQGEAPLILPGVDRHAVAAVVQDWTGVPVLNMLKNE
VGNVLRLDELLDRRIIGQHHATRMIARRVQTSRAGLDDPNKPVGVFLLAGTSGVGKTETALALAEALYGGEQNLITINMS
EYQEAHTVSLLKGAPPGYVGFGEGGVLTEAVRRRPHSVVLLDEVEKAHPDVHELFFQVFDKGRMDDSEGRSIDFRNTLIL
LTTNAGTDCIAELCTGPRAPAPMEVIERELHAQLLQTFPPALLGRMVTIPYYPLSGDMLRAIIRLQLGRVAERVTSTHRV
PFTYDDDVVAQIALRCTRLESGGRMIDAILTNSVLPRISTEYLSRVMAGTALSRVHVGVEDEEFTYAFD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 0.0 51
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 4e-98 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BYI23_C003660 YP_004978950.1 chaperone VFG2076 Protein 0.0 65
BYI23_C003660 YP_004978950.1 chaperone VFG2084 Protein 3e-132 42
BYI23_C003660 YP_004978950.1 chaperone VFG0079 Protein 3e-97 41