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Name : Oweho_1470 (Oweho_1470) Accession : YP_004989111.1 Strain : Owenweeksia hongkongensis DSM 17368 Genome accession: NC_016599 Putative virulence/resistance : Unknown Product : DNA-directed RNA polymerase subunit beta Function : - COG functional category : - COG ID : - EC number : - Position : 1598755 - 1602579 bp Length : 3825 bp Strand : - Note : PFAM: RNA polymerase Rpb2, domain 3; RNA polymerase Rpb2, domain 6; RNA polymerase Rpb2, domain 2; RNA polymerase beta subunit; RNA polymerase beta subunit external 1 domain; RNA polymerase Rpb2, domain 7; TIGRFAM: DNA-directed RNA polymerase, beta subuni DNA sequence : ATGTCCAAAAACCCAGTTACAAAAAATCTTTCGGAAAGAATAAACTTCGCGTCTATCAAGAACGCTTTCGATTATCCTGA TTTTTTGGATATTCAATTGCAGTCTTTCCACGATTTTTTCCAGCTAGACACTAAACCTGATGATCGACATGATGAAGGGC TTTATAAGACGTTTAGTGAAAACTTCCCCATTACTGATGCCAGAAACCAGTTTGTGCTGGAGTTTCTGGACTATTTCATA GACCCACCTCGCTATAGCGAAGAGGAGTGTATCGAAAGAGGACTTACATTCAGTGTACCACTTAAGGCTAGATTGAAGTT ATATTGTACAGACCCTGAACACGAGGATTTTGAAACCATTGTTCAGGATGTGTACCTAGGTACCATTCCTTATATGTCAC CACGCGGTACTTTTATCGTAAATGGGGCAGAAAGAGTAGTAGTGTCTCAGCTACACCGTTCTCCTGGTGTATTCTTTGGC CAAAGCTACCACGCTAATGGTACTAAATTGTATTCAGCACGTATTATCCCATTTAAGGGTAGCTGGATAGAATTTGCAAC AGACATCAACAGTGTGATGTATGCTTATATCGATCGTAAGAAGAAGTTACCACTTACTACACTTCTTCGTGCTATTGGAT ATGAGCGCGATAAAGACATTTTGGAAATCTTTGATCTTGCAGAAGAAGTAAAGGTTTCTAAATCCGGCCTTAAAAAGGTG TTGGGCAGAAAACTAGCTGCTCGTGTATTGAAAACCTGGGTTGAGGATTTCGTGGATGAAGATACTGGTGAAGTAGTATC TATTGAGCGTAATGAAGTAGTGTTAGATCGTGACACTGTTTTAGAAAAAGAACACATTGATGAGATTGTAGATGCTGACG TGCAAACTATTCTTCTTCACAAAGAGGATATCGAAGCATCAGAATTCTCAATCATTCATAATACATTACAAAAAGATCCA ACTAACTCTGAGAAAGAAGCGGTGGAGCACATCTACCGACAGTTGAGAAACGCTGAGCCGCCAGATGAGGAAACTGCTCG TGGTATCATCGACAAGCTGTTCTTCTCTGAGCAACGTTACAATCTTGGTGAGGTAGGTCGTTACCGCCTAAACAAGAAAT TGGGTCTTGATATTGCAGCTGATACTCAGGTATTAACAAAGGATGATATCCTAAACATTGTAAAATACCTTATTGAGCTT ATCAACTCAAAAGCTGAAGTGGATGATATTGACCACTTGAGCAACAGACGTGTGCGTACTGTAGGTGAGCAAATGGCTAA CCAATTTGGTGTAGGTCTTGCTCGTATGGCTCGTACCATTCGTGAGCGTATGAACGTACGTGACAACGAAGTATTTACCC CGATTGATTTGATCAACGCGAAGACACTTTCTTCTGTGATCAACTCATTCTTTGGTACAAACCAGCTTTCTCAGTTTATG GATCAAACCAATCCATTGGCCGAGATTACGCATAAGCGTAGACTTTCAGCCCTAGGGCCTGGTGGTCTATCTCGTGAAAG AGCAGGTTTTGAAGTACGTGACGTTCACTATACCCACTACGGTCGTCTTTGCCCTATTGAAACTCCTGAAGGACCAAACA TTGGTTTGATTTCTTCTATGTGTGTTTACTCTAAGGTAAACCGTATGGGATTCCTTGAAACTCCTTATCGTAAAGTGGTA GAAGGTAAAGTAGATTTTGCTACTCCACCAGTATACCTAAGCGCAGAAGAGGAAGAAGAAAAGGTAATTGCACAAGCAAA TGCTCCGGTAAAAGAAGATGGATACTTTGAAAACGACCGTGTAAAAGCACGTGATGAAGCAGATTATCCTCTTATTGAGC CAGATAAGCTTGATTATATGGACGTTTCTCCTAATCAGATTGCATCTATTTCTGCATCTCTTATTCCGTTTTTGGAGCAT GATGATGCGAACCGTGCATTGATGGGATCAAACATGATGCGTCAGGCCGTACCATTGTTGCGCCCTGAAGCTCCAGTTGT AGGAACAGGTCTTGAAGGCCGCGTAGCTAGTGATAGCCGTGTGCTTATCAACGCTGAAGGTAGTGGAGTAGTAGAATATG TAGATGCTGAAAAGATCACCATTAAGTATGACCGTACTGATGATGAGCGCTTGGTAAGCTTCGAAGATGATTCCAAAACT TATAACCTTGTTAAGTTCCGCAAGACTAACCAAGGTACATGTATCAACATTAACCCAATCGTTGTAAAAGGCGAAACCGT TAAGAAAGGTCAAGTACTTTGCGAAGGTTATGCAACCGAAGGTGGTGAATTGGCACTTGGTAGAAATATGCAAGTGGCAT TTATGCCTTGGAAAGGGTACAACTTTGAGGATGCAATTGTAATCTCAGAAAGAGTTGTTCGTGAAGATATCTTCACCTCT ATCCATATTGATGAATATTCATTGGACGTAAGAGATACTAAGCTTGGTGCTGAAGAACTTACTGCTGATATTCCAAACGT GAGTGAAGAGGCAACTCGTGAGCTTGACGAAAATGGAATTATTCGCGTAGGAGCAGAGGTAAAAGCTGGTGATATCCTTA TCGGAAAGATTACTCCAAAAGGAGAATCTGATCCTACTCCAGAAGAAAAATTACTTCGCGCCATATTTGGTGATAAAGCT GGTGATGTAAAAGATGCATCCCTTAAGGCTTCTCCATCATTGCAAGGTGTGGTAATTAATAAAAAGCTATTCTCAAGATC AGTAAAAGACAAGAAGACTCGTCTTGCTGACAAAGAAGTTCTTGAAAAACTTGAGGAAGAATTTAACATGCAGGTGGAAA CTATCCGCCAGAAATTCCTTGAAAAGCTAAATATACTTGTTGCCGGTAAAACCAGCCAAGGTGTAAAAAATGATCTTCAT GAAGACGTGATTCCAAAAGGAACCAAGTTTACTCAAAAGATCCTTAACAGTATAGATGACTATACTCGCATCACTGGTGG AACCTGGACAACAGATGCTGAGAAGAATGACCTTATCGCTACTCTTATCCATAACTACAAGATCAAGGTGATGGATGTAT TGGGAGTATACAAGCGTGAGAAATTTACCATCAGCATTGGTGACGAATTGCCATCAGGTATTGTGAAAATGGCCAAAGTA TACATCGCTAAAAAGCGTAAGCTTAAAGTGGGTGATAAAATGGCTGGACGTCACGGTAACAAAGGTATCGTTGCTAAGAT CGTTCGTGATGAGGACATGCCATTCCTTGAGGATGGAACTCCTGTGGATATCGTATTGAACCCACTGGGTGTACCTTCTC GTATGAACATCGGACAGATTTATGAAACCGTACTAGGATGGGCTGGTAAGAAGCTTGGTAGAAAATATGGTACTCCAATT TTTGATGGAGCATCACTTGATGATATCAATGCAATTACCGATGAAGCAGGAATTCCACAGTTTGGTCACACCTTCCTTTA TGATGGTGGTACCGGTGAGAAATTCCACCAAGCGGCATCAGTAGGTGTGATTTACATGCTTAAGCTGGGTCACATGGTAG ATGATAAAATGCACGCTCGTTCTATTGGACCTTACTCGCTTATTACGCAACAGCCACTTGGAGGTAAAGCTCAATTTGGA GGTCAGCGTTTTGGAGAGATGGAAGTTTGGGCTCTTGAAGCATTTGGTGCTTCAAACATCCTTCGCGAAATTTTGACTGT AAAGTCGGATGACGTAGTGGGTAGAGCTAAAACCTATGAAACCATAGTGAAGGGAGAACCAATGCCTGAACCAGGTATCC CTGAATCTTTCAACGTGTTACTACACGAATTGAACGGTCTTGGTTTGAAGATCACTTTGGATTAA Protein sequence : MSKNPVTKNLSERINFASIKNAFDYPDFLDIQLQSFHDFFQLDTKPDDRHDEGLYKTFSENFPITDARNQFVLEFLDYFI DPPRYSEEECIERGLTFSVPLKARLKLYCTDPEHEDFETIVQDVYLGTIPYMSPRGTFIVNGAERVVVSQLHRSPGVFFG QSYHANGTKLYSARIIPFKGSWIEFATDINSVMYAYIDRKKKLPLTTLLRAIGYERDKDILEIFDLAEEVKVSKSGLKKV LGRKLAARVLKTWVEDFVDEDTGEVVSIERNEVVLDRDTVLEKEHIDEIVDADVQTILLHKEDIEASEFSIIHNTLQKDP TNSEKEAVEHIYRQLRNAEPPDEETARGIIDKLFFSEQRYNLGEVGRYRLNKKLGLDIAADTQVLTKDDILNIVKYLIEL INSKAEVDDIDHLSNRRVRTVGEQMANQFGVGLARMARTIRERMNVRDNEVFTPIDLINAKTLSSVINSFFGTNQLSQFM DQTNPLAEITHKRRLSALGPGGLSRERAGFEVRDVHYTHYGRLCPIETPEGPNIGLISSMCVYSKVNRMGFLETPYRKVV EGKVDFATPPVYLSAEEEEEKVIAQANAPVKEDGYFENDRVKARDEADYPLIEPDKLDYMDVSPNQIASISASLIPFLEH DDANRALMGSNMMRQAVPLLRPEAPVVGTGLEGRVASDSRVLINAEGSGVVEYVDAEKITIKYDRTDDERLVSFEDDSKT YNLVKFRKTNQGTCININPIVVKGETVKKGQVLCEGYATEGGELALGRNMQVAFMPWKGYNFEDAIVISERVVREDIFTS IHIDEYSLDVRDTKLGAEELTADIPNVSEEATRELDENGIIRVGAEVKAGDILIGKITPKGESDPTPEEKLLRAIFGDKA GDVKDASLKASPSLQGVVINKKLFSRSVKDKKTRLADKEVLEKLEEEFNMQVETIRQKFLEKLNILVAGKTSQGVKNDLH EDVIPKGTKFTQKILNSIDDYTRITGGTWTTDAEKNDLIATLIHNYKIKVMDVLGVYKREKFTISIGDELPSGIVKMAKV YIAKKRKLKVGDKMAGRHGNKGIVAKIVRDEDMPFLEDGTPVDIVLNPLGVPSRMNIGQIYETVLGWAGKKLGRKYGTPI FDGASLDDINAITDEAGIPQFGHTFLYDGGTGEKFHQAASVGVIYMLKLGHMVDDKMHARSIGPYSLITQQPLGGKAQFG GQRFGEMEVWALEAFGASNILREILTVKSDDVVGRAKTYETIVKGEPMPEPGIPESFNVLLHELNGLGLKITLD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00346 | YP_008207811.1 | DNA-directed RNA polymerase, beta subunit/140 kD subunit | Not tested | AbaR25 | Protein | 0.0 | 46 |
| BJAB0868_00350 | YP_008211676.1 | DNA-directed RNA polymerase, beta subunit/140 kD subunit | Not tested | AbaR26 | Protein | 0.0 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Oweho_1470 | YP_004989111.1 | DNA-directed RNA polymerase subunit beta | NC_002516.2.881699.p | Protein | 0.0 | 48 |
| Oweho_1470 | YP_004989111.1 | DNA-directed RNA polymerase subunit beta | NC_009085.4918494.p0 | Protein | 0.0 | 46 |
| Oweho_1470 | YP_004989111.1 | DNA-directed RNA polymerase subunit beta | NC_011586.7046027.p0 | Protein | 0.0 | 46 |
| Oweho_1470 | YP_004989111.1 | DNA-directed RNA polymerase subunit beta | NC_010400.5987325.p0 | Protein | 0.0 | 46 |
| Oweho_1470 | YP_004989111.1 | DNA-directed RNA polymerase subunit beta | NC_010611.6233925.p0 | Protein | 0.0 | 46 |
| Oweho_1470 | YP_004989111.1 | DNA-directed RNA polymerase subunit beta | NC_011595.7060572.p0 | Protein | 0.0 | 46 |
| Oweho_1470 | YP_004989111.1 | DNA-directed RNA polymerase subunit beta | NC_010410.6003841.p0 | Protein | 0.0 | 46 |
| Oweho_1470 | YP_004989111.1 | DNA-directed RNA polymerase subunit beta | CP000675.2.gene392.p | Protein | 0.0 | 46 |
| Oweho_1470 | YP_004989111.1 | DNA-directed RNA polymerase subunit beta | NC_011035.1.6448762. | Protein | 0.0 | 45 |
| Oweho_1470 | YP_004989111.1 | DNA-directed RNA polymerase subunit beta | CP002695.1.gene18.p0 | Protein | 0.0 | 45 |
