|
Name : secD (KOX_12535) Accession : YP_005018472.1 Strain : Klebsiella oxytoca KCTC 1686 Genome accession: NC_016612 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecD Function : - COG functional category : - COG ID : - EC number : - Position : 2709150 - 2710964 bp Length : 1815 bp Strand : + Note : COG0342 Preprotein translocase subunit SecD DNA sequence : ATGCTGGTCGTCGTCATTGTCGTCGGCTTAGTGTATGCGCTTCCCAACCTGTATGGTGAGGATCCGGCCGTTCAAATCAC TGGCGCGCGCGGCGTCGCCGCCAGTGAGCAAACGCTGATCCAGGTCCAGAAAACACTACAAGAAGAAAAAATTACCGCGA AGTCTGTGGCACTGGAAGAGGGCGCAATTCTTGCGCGCTTCGACACCACTGATATCCAGCTGCGCGCGCGCGAAGCGCTG ATGGGCGTACTGGGTGACAAATACGTCGTGGCGCTTAACCTTGCTCCGGCAACCCCGCGCTGGCTGGCGGCCCTGTATGC CGAGCCGATGAAGCTGGGTCTTGATCTGCGCGGCGGCGTGCACTTCCTGATGGAAGTCGACATGGACACCGCGCTGGGCA AACTGCAGGAACAAAATATCGACAGCCTGCGCAGCGAGCTGCGTGATAAAGGCATTCCTTACGCGACCGTGCGTAAAGAA GACAACTATGGCCTGAGCATCGCTTTCCGCGACAGCGCCGCGCGCGACCAGGCTATCTCATACCTTAGCCCTCGTCACCG CGATCTGGTTATCTCCTCTCAGGGCAGCACTGGCCTGAAAGCCGTGATGACCGACGACCGTCTGAAAGAAGCCCGCGAAT ATGCCGTTCAGCAGAACATCAATATCCTGCGTAACCGTGTAAACCAGCTGGGCGTTGCCGAACCTCTGGTTCAGCGTCAG GGCGCCGACCGTATTGTGGTTGAACTGCCGGGTATCCAGGACACCGCGCGTGCGAAAGAGATCCTCGGCGCGACCGCGAC CCTGGAATTCCGTCTGGTTAACACTAACGTTGATAGCGCCGCGGCGGCCGCCGGTCGCGTTCCGGGCGACTCGGAAGTTA AATATACCCGCGAAGGCCAGCCGGTTGTGCTGTACAAGCGCGTCATCCTCACCGGTGACCACATCACCGACTCGACGTCG AGCATGGATGAGTACAACCAGGCGCAGGTTAACATCTCCCTGGATAGCGCTGGCGGCAACATCATGTCTAACTTCACCAA GGACAACATCGGTAAACCGATGGCGACCCTGTTTGTGGAGTACAAAGACAGCGGGAAGAAAGATGCCAGCGGGCGCGCGA TTCTGGCGAAAGAGGAAGAGGTGATTAACATCGCCAACATCCAGTCTCGTCTGGGTAACAGCTTCCGTATTACCGGCATC AGCAACCCGACCGAAGCGCGCCAGCTCTCCCTGCTGCTGCGTGCAGGCGCGCTGATTGCGCCGATTCAGATTGTTGAAGA ACGGACCATCGGTCCAACCCTCGGTATGCAGAACATCAAGCAGGGCCTGGAAGCGTGTCTGGCCGGTCTGGTGGTCTCTA TCCTGTTTATGATCTTCTTCTACAAGAAGTTCGGCCTGATTGCGACCTCTGCGCTGGTGGCTAACCTGGTGCTGATTGTC GGCATTATGTCCCTGATTCCGGGGGCGACGCTGACCATGCCGGGGATTGCGGGGATCGTGTTAACCCTTGCGGTGGCGGT CGATGCGAACGTTCTGATTAACGAACGTATTAAAGAAGAGCTGAGCAACGGGCGCTCCGTGCAGCAGGCGATTGACGAAG GTTATCGCGGCGCGTTCAGCTCCATCTTTGATGCCAACATTACGACGCTTATCAAAGTCATTATCCTGTACGCGGTCGGT ACCGGTGCCATTAAAGGGTTTGCGATTACCACCGGTATCGGTATTGCGACCTCAATGTTTACCGCTATCGTCGGCACCCG TGCCATCGTGAACCTGCTGTACGGCGGCAAGCGCGTTAAAAAGCTGTCTATCTGA Protein sequence : MLVVVIVVGLVYALPNLYGEDPAVQITGARGVAASEQTLIQVQKTLQEEKITAKSVALEEGAILARFDTTDIQLRAREAL MGVLGDKYVVALNLAPATPRWLAALYAEPMKLGLDLRGGVHFLMEVDMDTALGKLQEQNIDSLRSELRDKGIPYATVRKE DNYGLSIAFRDSAARDQAISYLSPRHRDLVISSQGSTGLKAVMTDDRLKEAREYAVQQNINILRNRVNQLGVAEPLVQRQ GADRIVVELPGIQDTARAKEILGATATLEFRLVNTNVDSAAAAAGRVPGDSEVKYTREGQPVVLYKRVILTGDHITDSTS SMDEYNQAQVNISLDSAGGNIMSNFTKDNIGKPMATLFVEYKDSGKKDASGRAILAKEEEVINIANIQSRLGNSFRITGI SNPTEARQLSLLLRAGALIAPIQIVEERTIGPTLGMQNIKQGLEACLAGLVVSILFMIFFYKKFGLIATSALVANLVLIV GIMSLIPGATLTMPGIAGIVLTLAVAVDANVLINERIKEELSNGRSVQQAIDEGYRGAFSSIFDANITTLIKVIILYAVG TGAIKGFAITTGIGIATSMFTAIVGTRAIVNLLYGGKRVKKLSI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 4e-114 | 48 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 1e-114 | 48 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 6e-114 | 47 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 6e-114 | 47 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 6e-114 | 47 |
