Gene Information

Name : KOX_17870 (KOX_17870)
Accession : YP_005019535.1
Strain : Klebsiella oxytoca KCTC 1686
Genome accession: NC_016612
Putative virulence/resistance : Virulence
Product : RNA polymerase sigma factor FecI
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3872503 - 3873024 bp
Length : 522 bp
Strand : -
Note : COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog

DNA sequence :

ATGTCACCTTCTTCCGCCATCGCCTCTCCGCTGACGCTTGCCTCGCTCTATAGCGACCATCATGGCTGGCTGAAAAAATG
GCTTACCCATAAGCTGCAATCCGCATATGACGCCGACGACGTAGCGCAGGACACCTTTGTCCGAATTATGGCCGGCGAGT
CGCTGTTGACGATTCGCGATCCAAAATCTTTTCTCTGCACGATTGCCAAACGGGTGATGATCGACCTGTTCCGCCGCAAC
GCCCTGGAGCGCGCCTGGCTCGACATGCTCTCTCAGCTACCGCCAGAGCTCTCTCCCTCACCGGAGCTACGGCAGAGCCA
GCTCGAACTGTTACAGCAGATTGATGCCATGCTGGACGGGCTTAACACAAAAGCCCGGGAAGCGTTTTTGCTCTCGCAGC
TTGAAGGGCTGACCTACGCCGATATCGCCAGTCGCCTGGCGGTTTCCGTCAGTTCGGTTAAGAAATATATCGCGAAAGCC
ACCGAGCACTGCCTGCTGTTCCGTCTGGAGAATGGCCTGTGA

Protein sequence :

MSPSSAIASPLTLASLYSDHHGWLKKWLTHKLQSAYDADDVAQDTFVRIMAGESLLTIRDPKSFLCTIAKRVMIDLFRRN
ALERAWLDMLSQLPPELSPSPELRQSQLELLQQIDAMLDGLNTKAREAFLLSQLEGLTYADIASRLAVSVSSVKKYIAKA
TEHCLLFRLENGL

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
unnamed	AAL08458.1	FecI	Virulence	SRL	Protein	3e-51	70

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
KOX_17870	YP_005019535.1	RNA polymerase sigma factor FecI	VFG1049	Protein	1e-51	70