Gene Information

Name : Dsui_2948 (Dsui_2948)
Accession : YP_005029125.1
Strain : Dechlorosoma suillum PS
Genome accession: NC_016616
Putative virulence/resistance : Virulence
Product : sigma-70 family RNA polymerase sigma factor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3154650 - 3155147 bp
Length : 498 bp
Strand : +
Note : PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family

DNA sequence : 
TTGGCTATTGTCTCATCCGATCCCCTCGCCCACCTCTACCGCGCCCATCACGGCTGGCTGCACGGCTGGCTGCGGCGCCA
GCTGGGCTGCAGCCACCAGGCCGCCGACCTGGCCCAGGACACCTTCCTGCGCCTGCTGGGCCGGCGCAGTGCCGACCTGG
GGGAACCCCGGGCCCTGCTCACCCACATCGCCAAGGGCCTGGTGGTGGACCACTGGCGTCGCCGGGCGGTGGAGCAGGCC
TATCTGGAGGTCCTGGCCCGGCTGCCGGAAGCCCAGGCCCCCTCGCCGGAAACCCGCCTGCTGGTGCTGGAAGCCCTGTG
CCGGGTGGACGCCATGCTGGCCGGACTGCCGCCCAGGACCCGGGAGATATTCCTCCTCTCCCAGCTCGACGGCCTCACCT
ACGGCGCCATCGCCGAACGCCTGGGCACCTCCCTCATCACCGTCAAGCGCCACATGCGCAACGGCTTCATCGCCTGCATG
GCGGCCCTGGAGGACTGA

Protein sequence : 
MAIVSSDPLAHLYRAHHGWLHGWLRRQLGCSHQAADLAQDTFLRLLGRRSADLGEPRALLTHIAKGLVVDHWRRRAVEQA
YLEVLARLPEAQAPSPETRLLVLEALCRVDAMLAGLPPRTREIFLLSQLDGLTYGAIAERLGTSLITVKRHMRNGFIACM
AALED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08458.1 FecI Virulence SRL Protein 4e-32 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dsui_2948 YP_005029125.1 sigma-70 family RNA polymerase sigma factor VFG1049 Protein 2e-32 50