Gene Information

Name : Dsui_2977 (Dsui_2977)
Accession : YP_005029154.1
Strain : Dechlorosoma suillum PS
Genome accession: NC_016616
Putative virulence/resistance : Virulence
Product : sigma-70 family RNA polymerase sigma factor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3184055 - 3184567 bp
Length : 513 bp
Strand : -
Note : PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family

DNA sequence :
ATGAGCGCCGTCCTTTCCCAATCCGATCTGGCCGTGGCCACCCTCTACCGGGAGCACGGCGGGTGGCTGCGTTCCTGGCT
GCGGCACAAGCTGGGTTGCGCCGAGAGTGCCGCTGATCTGGCCCAGGACACCTTCTGCCGCATCCTGCGGCGGGAAAACC
TGGAGGGGCTGCGGGAACCCCGGGCCTACCTGACCACGGTGGCCCACGGCCTGGTGGTGGACCATTGGCGGCGCCTGGAA
ATCGAGCGGGCCTACCTGGAAGCCCTGGCCTGGCAGCCCGAGGCCCTGGCTCCGTCGCCGGAGGAGCGGGCCCTGGTGCT
GGAGGCACTGCTGGAAATCGAGGCCCTGCTCGCGGCCCTGCCGGAGAAGGTGCGCCAGGCCTTCCTCCTGGCCCAGCTCG
ATGGCCTGGGCTACCAGGAGATCGGCGAGCGCCTGGGCGTTTCCGAGCGCATGGTGAAGAAGTACATGGCCCGGGCCATG
CTCCACTGCCTGTTGGCCGGAGGCGCCGCTTGA

Protein sequence :
MSAVLSQSDLAVATLYREHGGWLRSWLRHKLGCAESAADLAQDTFCRILRRENLEGLREPRAYLTTVAHGLVVDHWRRLE
IERAYLEALAWQPEALAPSPEERALVLEALLEIEALLAALPEKVRQAFLLAQLDGLGYQEIGERLGVSERMVKKYMARAM
LHCLLAGGAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08458.1 FecI Virulence SRL Protein 4e-30 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dsui_2977 YP_005029154.1 sigma-70 family RNA polymerase sigma factor VFG1049 Protein 2e-30 52