Gene Information

Name : rnhA (AZOBR_150040)
Accession : YP_005032006.1
Strain : Azospirillum brasilense Sp245
Genome accession: NC_016617
Putative virulence/resistance : Unknown
Product : ribonuclease H (RNase H)
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2204268 - 2204762 bp
Length : 495 bp
Strand : +
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 1311386, 1646006, 1698262, 2169648; Product type e : enzyme

DNA sequence :
ATGACGGACACCACGGAGACCGGCACCGACGGTGACAAGAGCGCGCCGAAGGTTGTCGACATCTTCACCGACGGCGCGTG
CAGCGGCAACCCCGGCCCCGGCGGCTGGGGCGCCATCCTGCGCTACAACGGGGTGGAGAAGGAGCTGTACGGCGGCGAGC
CGGCCACCACCAACAACCGCATGGAGCTGATGGCCGCCATCCAGGCGCTGGAAGCTCTGAAGCGGCCCATGGAGGTGCGG
CTCTACACCGACAGCGAGTATGTGAAGAACGGCATCACCCAGTGGATTCACGGCTGGAAGGCCCGTGGCTGGAAGACCGC
CGACAAGAAGCCGGTGAAGAACGAGGATTTGTGGCGCCGCCTGGACGAGGCGAAGCGGCAGCACCGGATCGAGTTCCACT
GGGTCCGTGGCCATGCCGGCCACCCGGAGAACGAGCGGGCCGACGCGCTGGCCCGCCAGGGCGTCGCCGAGGTCCGGCAG
ACCGGGCGGGGCTGA

Protein sequence :
MTDTTETGTDGDKSAPKVVDIFTDGACSGNPGPGGWGAILRYNGVEKELYGGEPATTNNRMELMAAIQALEALKRPMEVR
LYTDSEYVKNGITQWIHGWKARGWKTADKKPVKNEDLWRRLDEAKRQHRIEFHWVRGHAGHPENERADALARQGVAEVRQ
TGRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rnhA AAO17224.1 RnhA Not tested tcd island Protein 1e-37 60