Gene Information

Name : rnhA (AZOLI_1310)
Accession : YP_005038856.1
Strain : Azospirillum lipoferum 4B
Genome accession: NC_016622
Putative virulence/resistance : Unknown
Product : Ribonuclease H (RNase H)
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1241818 - 1242294 bp
Length : 477 bp
Strand : -
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 1311386, 1646006, 1698262, 2169648; Product type e : enzyme

DNA sequence :
ATGACCGACGACGGCCCCCCGACCGAATCCGCCCGCAAGACCGTCGACATCTTCACCGACGGTGCCTGCAGCGGAAATCC
CGGCCCCGGCGGCTGGGGCGCGATCCTGCGCTATGGCGAGGTGGAGAAAGAGCTGTATGGCGGCGAGCCGGCGACCACCA
ACAACCGCATGGAGCTGATGGCGGCCATCATGGCGCTGGAAGCGCTGAAGAAGCCGGTGACCGTCCGGCTCTTCACCGAC
AGCGAATATGTGAAGAACGGCATCACCAAGTGGATCCATGGCTGGAAAGCCAAGGGCTGGATGACCGCCGACCGCAAGCC
GGTGAAGAACGTCGACCTGTGGCAACGCCTGGAAGAGGCGAAGCGGCAGCACCAGATCGAATTCCACTGGGTCCGTGGCC
ACGCCGGCCATCCGGAGAACGAACGCGCCGACGAACTGGCCCGGCGCGGGGTGGCTGACGTGCGGGCGCGGAGTTGA

Protein sequence :
MTDDGPPTESARKTVDIFTDGACSGNPGPGGWGAILRYGEVEKELYGGEPATTNNRMELMAAIMALEALKKPVTVRLFTD
SEYVKNGITKWIHGWKAKGWMTADRKPVKNVDLWQRLEEAKRQHQIEFHWVRGHAGHPENERADELARRGVADVRARS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rnhA AAO17224.1 RnhA Not tested tcd island Protein 1e-31 62