Gene Information

Name : BYI23_D001460 (BYI23_D001460)
Accession : YP_005043179.1
Strain :
Genome accession: NC_016626
Putative virulence/resistance : Virulence
Product : type IV / vi secretion system protein, dotu family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 171206 - 172549 bp
Length : 1344 bp
Strand : -
Note : -

DNA sequence :
CTGAGGCCACTAAGGCCACCGAAACCATCGAGCGCCATGAGCAACGACGACGATCCCTTCGCCGGATTCGAATCCGACCA
GACGATGATCAAGCCCAATCCCGGCGCACGCCGCCGCACCGGGAACACGCAAGGGCCCTTCACGCCGGGCGCGGCTGCCG
ATGCGGGCGTGCATGCCTTCGATGCCGCGTTCACGCAGGGCGGCGCGGTCAATCCGCTGGTCGCCGCGTGCGCGCCGCTG
TTGCAGCTTGCGCCGCGCATCCGCACCATGAGCGCCTGCGACGATCCCGCCGCGCTGCGCGATTCGCTCGCGGCGGGCGT
GCGCCGCTTCGAGGCGCAGGCGCGCGTCAACGGCGTCGCGGCGGAACAGGTGACGGCGGCGCGCTACATCGTCTGCACGA
TGCTCGACGAAGCCGCCGCGGGCACGCCGTGGGGCGCGGGCGTGTGGGCGCGCCAGAGCCTGCTCGTGACGTTTCATAAC
GAAGCATGGGGCGGCGAGAAGGTGTTCCAGCTGCTCGCCCGCCTCGCGCAGCAGCCCGCCCGGCATCTGCATCTGCTGGA
GCTGGCGAGCGTGGTGCTCGCGCTCGGCTTCGAGGGACGCTATCGCGTGGCGGCGCAGGGCAGACAGGCGCTCGATGCGA
TCCGCGCGCGGCTTCATCAACTGATCCGCAAGGAGCGCGGCGAGCACGAACGCGCGCTGTCGCCGCATTGGGAAGGCGTG
CCGACGACGCGGCGGCGCACGACCGACGTGCTGCCGGTGTGGGTGGTCGGCGCGTTCGCGCTGCTCGTGCTCGCGGCGGC
TTATATGACGATGAGTTTCCGCCTCGGCCGCCTGTCCGATCCAGCCTTCGATGCGCTCGCGTCGATCCGCGCGGGCGTGC
AGCGGCCGCTCGTCGTCACGCAGGCGGCCAAGCCCCGTCTCGCCGAATTTCTCGCGCAGGAGATCCGCGATGGCCAACTG
GCCGTCGATGACCGCGTGGACCGCTCGGTCGTCACGCTGCACGGCGACAACGTGTTCAGGCCCGGCAGCGCGGAAGTGGC
GGCGCCGGTGCGCCCGCTCATCGAGCGCATCGGCGCGGCGCTCGCGGCGGTGCCGGGCAACGTGCTCGTGACGGGCCATA
CGGACGACCGGCCGATCCGCTCGGCGCGCTATCCGTCGAACTGGGAACTGTCGCAGGAGCGCGCCGCGAACGTGCGCGAC
CTGCTCGCGGCGAGCGTGCCGCCCGCGCGCCTGAAGGCCGAGGGCAAGGGCGATGCGGATCCCGTCGCACCCAACGATTC
GCCCGCCGGACGCGCGCGCAACCGGCGCGTCGAAGTGACGCTGTTCGCGAAGCCGGGGCCCTGA

Protein sequence :
MRPLRPPKPSSAMSNDDDPFAGFESDQTMIKPNPGARRRTGNTQGPFTPGAAADAGVHAFDAAFTQGGAVNPLVAACAPL
LQLAPRIRTMSACDDPAALRDSLAAGVRRFEAQARVNGVAAEQVTAARYIVCTMLDEAAAGTPWGAGVWARQSLLVTFHN
EAWGGEKVFQLLARLAQQPARHLHLLELASVVLALGFEGRYRVAAQGRQALDAIRARLHQLIRKERGEHERALSPHWEGV
PTTRRRTTDVLPVWVVGAFALLVLAAAYMTMSFRLGRLSDPAFDALASIRAGVQRPLVVTQAAKPRLAEFLAQEIRDGQL
AVDDRVDRSVVTLHGDNVFRPGSAEVAAPVRPLIERIGAALAAVPGNVLVTGHTDDRPIRSARYPSNWELSQERAANVRD
LLAASVPPARLKAEGKGDADPVAPNDSPAGRARNRRVEVTLFAKPGP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0305 NP_454885.1 putative membrane protein Not tested SPI-6 Protein 1e-50 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BYI23_D001460 YP_005043179.1 type IV / vi secretion system protein, dotu family VFG2064 Protein 8e-80 48