Gene Information

Name : Clocl_1012 (Clocl_1012)
Accession : YP_005045613.1
Strain : Clostridium clariflavum DSM 19732
Genome accession: NC_016627
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1173907 - 1174764 bp
Length : 858 bp
Strand : +
Note : PFAM: Transketolase, thiamine diphosphate binding domain

DNA sequence : 
ATGACAAGTGAGCAGCTTGCATGGAAAATAAGACGTCATGCAATTGAAATGACACATATATCAAAAGGTTCTCATATAGG
TTCGATTTTATCCGTAGCAGATATTGTCGCTGTTCTGTACAACGATATAGCTTATGTAAACCCAAAAGATCCAAAAATGT
ACGACAGGGACAGAATCATCCTCAGCAAAGGGCATGCCGGTGCAGCTATATATATTGCTCTTGCCGAAAAAGGCTTTTTT
GATGTGGAGGAATTAAAAACCCACTATGCTGACGGCAGCAGACTATCGGGGCATGTGTCCCACAAAGGAGTTCCCGGAGT
GGAGTTTTCAACCGGTTCCCTTGGACATGGTTTGTCGGTGGCAGCCGGCATGGCTTATGCGGCCAAAAAGGACAATAGAC
AACATAGAGTGTTTGTAATCTGCGGTGATGGGGAATGTGATGAAGGGGCAGTATGGGAAGCTGCTTTGGTAGCTAACCAT
TATAAACTCAATAATCTTATTACTGTCATTGACCACAACAAAATGCAAAGCCTCGACTTTTGCGAAAACACCATTTCCCT
TTCACCTTTTGCTGACAAATGGAAGGCTTTTGGCTGGAATGTTATAGATATAGACGGTCATGATCATGATGCTTTGCGGG
CTGCATTCAACAAAGCAAAGCAGTCGGAAGATAAGCCTACGGTTATCATTGCAAACACAGTTAAGGGAAAAGGAATATCC
TTTATGGAAAACAACATACTTTGGCATTATCGCTATCCCCACGAAGGAGAGGAATATGACAGAGCTGTTGCAGAGTTGAA
AGATCAAATCCCGGAAGGCATTTTTGATATGTATGAGTCGGAGGCTGGCAAACTATGA

Protein sequence : 
MTSEQLAWKIRRHAIEMTHISKGSHIGSILSVADIVAVLYNDIAYVNPKDPKMYDRDRIILSKGHAGAAIYIALAEKGFF
DVEELKTHYADGSRLSGHVSHKGVPGVEFSTGSLGHGLSVAAGMAYAAKKDNRQHRVFVICGDGECDEGAVWEAALVANH
YKLNNLITVIDHNKMQSLDFCENTISLSPFADKWKAFGWNVIDIDGHDHDALRAAFNKAKQSEDKPTVIIANTVKGKGIS
FMENNILWHYRYPHEGEEYDRAVAELKDQIPEGIFDMYESEAGKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96117.1 transketolase Not tested T-PAI Protein 3e-36 42
unnamed AAT96056.1 transketolase Not tested T-PAI Protein 2e-36 42
unnamed AAT96229.1 transketolase Not tested T-PAI Protein 7e-36 41
unnamed AAT96100.1 transketolase Not tested T-PAI Protein 9e-36 41
unnamed AAT96177.1 transketolase Not tested T-PAI Protein 8e-36 41