Gene Information

Name : Clocl_1838 (Clocl_1838)
Accession : YP_005046371.1
Strain : Clostridium clariflavum DSM 19732
Genome accession: NC_016627
Putative virulence/resistance : Unknown
Product : cysteine desulfurase NifS
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2114888 - 2116069 bp
Length : 1182 bp
Strand : -
Note : PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurase NifS

DNA sequence :
ATGGATAACAGGATAATATATTTGGATCATGCAGCAACAACACCTGTAAAACCTGAGGTTCTTGAAGAAATGTTGCCTTA
TTTTACAAATAAATTCGGTAATGCCTCATCGATATACAGTATCGGAAGAGAAAGCAAGAAAGCAATAGAAGAGGCAAGGG
AAAGAGTTGCAAAAGCTTTGGGTGCTATGCCAAGGGAGATATTCTTTACAGGTTCCGGTTCTGAAGCAGATAACTGGGCA
ATCAAAGGAGTGGCTTATGCCAATAAAGCAAAAGGGAATCACATAATTACTACTGCCATAGAACATCATGCTGTGCTTCA
CACTTGCCAATACCTTGAAAGCGACGGCTTTGAAGTTACCTATCTTCCGGTGGATGAAAACGGATTGGTATCACCGGAAC
AGGTAAGAAAAGCAATTAAGCCCTCTACCACCTTGATAACAATAATGTTTGCCAATAATGAGATCGGTACCATTCAGCCA
ATAGCTGAGATCGGGAAAATTGCAAAAGAGCATAATATTTATTTTCACACCGATGCAGTACAGGCTGTCGGCAACATACC
GATAAATGTTAATGAATTGAATGTAGACTTATTATCGCTATCAGCTCATAAATTCTATGGACCTAAAGGTGTAGGGGCAT
TGTATATAAGAAAAGGCGTAAAAATTACAAATTTCCTTCATGGCGGAGCACAGGAAAGAGGAAGAAGGGCCAGTACAGAA
AATGTAGCCGGAATAGTGGGCCTTGGTAAAGCGATTGAGCTTGCAACAAATAATATTGAGCAGTATAATAAGAAATTGAT
TGAATTAAGGGACAGGACTATTGAAGAAATTACTAAAAAAGTACCTTTTGTAAAATTAAACGGTGACAGGTATAAAAGGT
TACCGGGAAATGTTAATTTTTCGTTCCAGTTTATTGAGGGTGAGTCGCTTTTATTGATGCTTGATATGAAAGGTATCGCA
GCATCCAGCGGTTCCGCATGTACTTCAGGTTCATTAGATCCGTCCCATGTTCTGTTGGCTATTGGACTTGACCATGAAAC
AGCCCATGGTTCACTAAGAATAACTTTCGGAGAAGAAAATACCCACGAGGATGTGGATTATCTGATGGAAGTACTTCCTG
CGATAGTTCAGAGGTTGAGGGAAATGTCTCCATTATATGAAAAAGTGAAAAGAGGGAATTGA

Protein sequence :
MDNRIIYLDHAATTPVKPEVLEEMLPYFTNKFGNASSIYSIGRESKKAIEEARERVAKALGAMPREIFFTGSGSEADNWA
IKGVAYANKAKGNHIITTAIEHHAVLHTCQYLESDGFEVTYLPVDENGLVSPEQVRKAIKPSTTLITIMFANNEIGTIQP
IAEIGKIAKEHNIYFHTDAVQAVGNIPINVNELNVDLLSLSAHKFYGPKGVGALYIRKGVKITNFLHGGAQERGRRASTE
NVAGIVGLGKAIELATNNIEQYNKKLIELRDRTIEEITKKVPFVKLNGDRYKRLPGNVNFSFQFIEGESLLLMLDMKGIA
ASSGSACTSGSLDPSHVLLAIGLDHETAHGSLRITFGEENTHEDVDYLMEVLPAIVQRLREMSPLYEKVKRGN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96060.1 cysteine desulfurase Not tested T-PAI Protein 2e-64 45