Gene Information

Name : Desaf_1275 (Desaf_1275)
Accession : YP_005051273.1
Strain : Desulfovibrio africanus Walvis Bay
Genome accession: NC_016629
Putative virulence/resistance : Unknown
Product : cysteine desulfurase NifS
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1407752 - 1408996 bp
Length : 1245 bp
Strand : -
Note : TIGRFAM: Cysteine desulfurase, NifS, bacterial/archaeal; KEGG: dvm:DvMF_2659 cysteine desulfurase NifS; PFAM: Aminotransferase, class V/Cysteine desulfurase

DNA sequence :
ATGTCCCACGGACCAGCTCAAGACAAGCCCCAGGTCATCTACCTGGACAACAACGCCACCACGCGCGTGGCTCCCGAGGT
GCTGGAGGAGATGCTGCCGTTCCTCTCGGATTACTACGGCAACCCCTCCAGCATGCATTCCTTCGGCGGCAAGGTCGGCG
GCAAGATCAACCAGGCCCGCGAGCGCGTGGCCGCGGCCCTGAGCTGCGACCCGCGCGAGATCGTGTTCACCTCCTGCGGC
ACCGAGAGCGACAACACGGCCCTGCACTCGGCCGTGAGCGCCAGGCCCGACAAGCGCCACATCGTGACCACCCGCGTGGA
GCACCCGGCCGTGCTCAACTACGTGAAACTCCTGGAGCAGCAGGGCTACTCCGTGACCTGGCTGCCCGTGGACAAGCATG
GCCGCCTGGACCTGGAGCATGTGCGCGAGGCCATCCGCGCGGACACGGCCGTGGTCTCGGTCATGTGGGCCAACAACGAG
AGCGGCACCATCTTTCCGGTGCGCGAGATCGGGGCCATGTGCCGCGAAAAAGGCGTGCCCTTCCACACCGACGCGGTGCA
GGCCGTGGGCAAGATCCCCGTGAACCTCAAGGAACTGCCCTGCGACTACCTGGCCCTGTCGGGCCACAAGATCCACGCGC
CTAAGGGCATTGGCGCGCTCTATGTGCGCAAGGGCATGCTCTTCAAGCCCTTCATGATCGGCGGCCACCAGGAGCGCGGC
CGGCGCGGCGGCACCGAGAACGCCGCCTCCATCATCGGTCTGGGCAAGGCCATGGAGCTGGCCGCGGCGGGCATCCAGGA
CGAGAACACCAGGGTCAAGGCTCTGCGCGATCGTCTGGAGAAAGGACTCATAGGGGTCATTCCCGAAGCCCTGATCAACG
GCGACCCGGTCAACCGGTTGCCCAATACCCTGTCCATCGCATTCAAGTACATCGAGGGCGAGGCCATGCTGCTGCTGCTC
GACCAGTTCGGCATCTGCGCCAGCTCGGGCTCGGCCTGCACCTCGGGCAGCCTGGAGCCTTCGCACGTGCTGCGGGCCAT
GGGCGTGCCCTTCACCTATGCCCACGGTTCCCTGCGCTTCTCATTGTCGCGCTACACGACGGAGGCGGAGATCGACACGG
TCGTGCGCGAACTGCCCAAGATCGTGGCGCGGCTGCGGGCCATGTCGCCGTTTTCCGCGGATAGTGAGACCGAGGGCCAG
CACAAGGCCGTAGCGGCCTGCGCCGTGGAACGCAGCACGGAATAA

Protein sequence :
MSHGPAQDKPQVIYLDNNATTRVAPEVLEEMLPFLSDYYGNPSSMHSFGGKVGGKINQARERVAAALSCDPREIVFTSCG
TESDNTALHSAVSARPDKRHIVTTRVEHPAVLNYVKLLEQQGYSVTWLPVDKHGRLDLEHVREAIRADTAVVSVMWANNE
SGTIFPVREIGAMCREKGVPFHTDAVQAVGKIPVNLKELPCDYLALSGHKIHAPKGIGALYVRKGMLFKPFMIGGHQERG
RRGGTENAASIIGLGKAMELAAAGIQDENTRVKALRDRLEKGLIGVIPEALINGDPVNRLPNTLSIAFKYIEGEAMLLLL
DQFGICASSGSACTSGSLEPSHVLRAMGVPFTYAHGSLRFSLSRYTTEAEIDTVVRELPKIVARLRAMSPFSADSETEGQ
HKAVAACAVERSTE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96060.1 cysteine desulfurase Not tested T-PAI Protein 1e-57 43