Gene Information

Name : Desaf_2408 (Desaf_2408)
Accession : YP_005052391.1
Strain : Desulfovibrio africanus Walvis Bay
Genome accession: NC_016629
Putative virulence/resistance : Unknown
Product : Ribonuclease H
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2677190 - 2677663 bp
Length : 474 bp
Strand : -
Note : KEGG: dvm:DvMF_2669 ribonuclease H; HAMAP: Ribonuclease H; PFAM: Ribonuclease H

DNA sequence :
ATGGCCATGGATAACAGCGTCACGATCTTTACCGATGGCTCCTGTCTGGGCAACCCCGGCCCCGGCGGCTGGTGCGCCAT
CCTGACCGAGGGCGAGCACAGCAAGGAGCTTTTCGGGGGCTACAAGCTGACCACCAACAACCGCATGGAACTGCTCGCGG
TCATCGAGGCCCTCACGGCCCTCAAACACCCCTGCCGCGTGGATCTGTGGACTGATTCACAATACGTGCGCAACGCCATC
GAGAAGCGCTGGATCGACTCCTGGCAGCGCAACGGCTGGAAAAACTCCGAGAAGAAGCCGGTCAAGAATCAGGATCTCTG
GCAGCGGTTGCTGCCCCTGCTGGCCACGCACCAAGTGCGTTTTCATTGGGTCCGGGGCCATAGCGGACACCGCGAGAACG
AGCGTTGCGACCAACTAGCCAGGTCCGCAGCCCAGAAGACCGGCTTGCCGGTGGACACGGGGTATCCCGGCTAA

Protein sequence :
MAMDNSVTIFTDGSCLGNPGPGGWCAILTEGEHSKELFGGYKLTTNNRMELLAVIEALTALKHPCRVDLWTDSQYVRNAI
EKRWIDSWQRNGWKNSEKKPVKNQDLWQRLLPLLATHQVRFHWVRGHSGHRENERCDQLARSAAQKTGLPVDTGYPG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rnhA AAO17224.1 RnhA Not tested tcd island Protein 2e-35 54