Gene Information

Name : Desaf_R0042 (Desaf_R0042)
Accession : -
Strain : Desulfovibrio africanus Walvis Bay
Genome accession: NC_016629
Putative virulence/resistance : Unknown
Product : 16S ribosomal RNA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3078339 - 3079877 bp
Length : 1539 bp
Strand : +
Note : RNAmmer 1.2, Lagesen et al., Nucleic Acids Res. Apr 22, 2007

DNA sequence : 
AGAGTTTGATCCTGGCTCAGATTGAACGCTGGCGGCGTGCCTAACACATGCAAGTCGTGCGAGAAAGTGGGCTTCGGCCC
GCGAGTACAGCGGCGCACGGGTGAGTAACACGTGGGTGATCTCCCTAACAGATTGGGATAACAGCGGGAAACTGCTGCTA
ATACCGGATACGATCCATTTAATCGTGGATGAAAGGCGGCCTCTGCTTGCAAGCTGCCACTGTTAGATGAGCCCGCGTCC
CATTAGCTTGTTGGCGGGGTAACGGCCCACCAAGGCGACGATGGGTAGCTGGTCTGAGAGGATGACCAGCCACACTGGGA
CTGAAACACGGCCCAGACTCCTACGGGAGGCAGCAGTGGGGAATATTGCGCAATGGGCGAAAGCCTGACGCAGCGACGCC
GTGTGAGGGAAGAAGGCCTTCGGGTCGTAAACCTCTGTCAGAAGGGAAGAACCCCCAAGGTTCGAATAGGGCTTTGGGCT
GACGGTACCTTCAGAGGAAGCACCGGCTAATTCCGTGCCAGCAGCCGCGGTAATACGGAAGGTGCAAGCGTTAATCGGAA
TTACTGGGCGTAAAGCGCACGTAGGCTGCTTTGTAAGTCGGATGTGAAAGCCCTCGGCCCAACCGGGGAACTGCATTCGA
AACTGCAAGGCTGGAGTCCTGGAGAGGGTGGCGGAATTCCCGGTGTAGGAGTGAAATCCGTAGATATCGGGAGGAACACC
AGTGGCGAAGGCGGCCACCTGGACAGGTACTGACGCTGAGGTGCGAAAGTGTGGGGAGCAAACAGGATTAGATACCCTGG
TAGTCCACACCGTAAACGATGGATGCTAGGTGTCGGGGAGTATTCTTCGGCGCCGTAGCTAACGCGTTAAGCATCCCGCC
TGGGGAGTACGGTCGCAAGGCTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGTATGTGGTTTAATTCG
ATGCAACGCGAAGAACCTTACCTGGGTTTGACATCCTTCGAACCTTCCAGAGATGGAGGGGTGCCCTTCGGGGAGCGAAG
AGACAGGTGCTGCATGGCTGTCGTCAGCTCGTGCCGTGAGGTGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTGTTGC
CAGTTGCCAGCACGTAATGGTGGGCACTCTGGCGAGACTGCCCGGGTCAACCGGGAGGAAGGTGGGGATGACGTCAAGTC
ATCATGGCCCTTACGTCCAGGGCTACACACGTACTACAATGGCGACTACAAAGGGCAGCTAAACCGCGAGGTCACGCCAA
TCCCAAAAAAGTCGTCCCAGTCCGGATTGCAGTCTGCAACTCGACTGCATGAAGCTGGAATCGCTAGTAATCGCAGATCA
GCATGCTGCGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCACGAAAGCCGGTTCTACCCGACATCGGT
GTGCCAACCAGCAATGGAGGCAGCCGCCTACGGTAGGGCTGGTGATTGGGGTGAAGTCGTAACAAGGTAGCCGTAGGGGA
ACCTGCGGCTGGATCACCT

Protein sequence : 
-

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
FTT_r07 - 16S ribosomal RNA Not tested FPI DNA e-104 88.4
FTT_r10 - 16S ribosomal RNA Not tested FPI DNA e-104 88.4
FTM_1085 - 16S ribosomal RNA Not tested FPI DNA e-104 88.4
FTM_1695 - 16S ribosomal RNA Not tested FPI DNA e-104 88.4
FTW_2069 - 16S ribosomal RNA Not tested FPI DNA e-104 88.4
FTW_2070 - 16S ribosomal RNA Not tested FPI DNA e-104 88.4