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Name : AciX8_0788 (AciX8_0788) Accession : YP_005056167.1 Strain : Granulicella mallensis MP5ACTX8 Genome accession: NC_016631 Putative virulence/resistance : Unknown Product : DNA-directed RNA polymerase subunit beta Function : - COG functional category : - COG ID : - EC number : - Position : 903141 - 907637 bp Length : 4497 bp Strand : + Note : KEGG: aca:ACP_2928 DNA-directed RNA polymerase subunit beta; TIGRFAM: DNA-directed RNA polymerase, beta subunit, bacterial-type; PFAM: DNA-directed RNA polymerase, subunit 2, domain 6; RNA polymerase Rpb2, domain 2; RNA polymerase Rpb2, domain 3; RNA poly DNA sequence : ATGTCGAATTCGACCACCAACGAAATGCGCGCGATCCGCAGCCGTCTCGACTTTTCCAAGATTCCAACCAGCATCCAGAT TCCGAATCTCATCGAGGTTCAGCGCCGCAGCTATGAGCGCTTCCTCCAGATGGACAAGCTCCCCCAGGAGCGCGAGGACA ACGGCCTCCAGTCTGTCTTTACCTCCGTGTTTCCCATCACCGACTTCCGCAATGTCTCTGAGCTCGAGTTCGTCGATTAC TCTATCGGCAACTGGGAGTGCAAGTGCGGTTACCTCAAGGGTCTGAACCACCTGCGCACGGCCTGCACCAACTGCGGCCA CATGGTCATCACCGACCCCTTCCACCCGGGCGATGTGCTCTGCAAGTTCTGCGGAACCTACAACAAGAACACCCCTGATT TCTGCACCAAGTGCGGCGATCCTGTCGGTCTGCAGCTGAAGTACGACCAGGCCGAGTGCGAAGAGCGCGGCATGACCTAC TCGGCTCCGCTGAAGGTCACCATCCGCCTGAAGATCTACGACAAGGACCCTGAGACGGGCGTCAAGAGCCTGCGTGACAT GAAGGAGCAGGAAGTCTTCTTTGGCGACATCCCCCTGATGTCGGCGAACGGCACCTTCATCGTCAACGGTACCGAGCGCG TCATCGTCAGCCAGTTGCACCGTTCGCCCGGCGTCTTCTTTGAGACGGCGAACAACCGTACCTACTTCCTCGGCAAGATC ATTCCGTACCGCGGTTCGTGGGTCGAGTTCGAGTACGACCAGAAGAACACCCTCTACGTCCGCATCGATCGCAAGCGCAA GTTCCTGGGCACCATCTTCCTTCGCGCGCTCGGTCTGCGCACGGACGAGGAGATCCTCAAGACCTTCTACACGGTCGACA CCATCAACGTGAAGGACGGCAAGCTGTCGTGGACGGTTGGCGCGGAAGAGAAGCCGAGCCACCTCGTCGGCACTCGCTCG ACCGCGGCCCTCAACGGCGCGGACGGCAAGGAGCTCGTCGCTTCCGGCAAGAAGATCGGCGCCTCCGCGCTGAAGCATCT TCGGGCGGGTGGCGTCACCTCGGTTGAGGTGGAGACCAGCGAGTTCGACGGCGCCATGATCGCGGCCGATGTCATCGACA TGGGCACCGGCGAGCTGCTGTACGAAGCCAACGCCGAGCTCACCGCCGACAAGCTGCACAAGATTCTGCAGTCCGGCGTT GCCACGTTCGAGGTCTTCTTCCCCGAGCGCGACGATGTAGGTAACATCATCTCGAACACCCTTCGCCGCGACTCCGTGCG CAAGCCGGAAGAGGCGTTGATCGAGATCTACCGCAAGCTGCGTCCCGGCGACCCACCGACGCTCGACACCGCGACCGCGC TCTTCGAAGGCATGTTCTTCGATCCGCGCAAGTACGACTTCTCGCGCGTTGGCCGTCTCAAGTTCAACATCAAGCTGTAT GAGGACCAGGACCCCAGCGGGCTCGACAAGCGCACGCTGACCCCTGAGGACTTCTACGGCACGATCCGTTACCTCCTCAA GCTGCGCAAGAACATCGGCGTAGTGGACGATATCGATCACCTTGGCAACCGCCGCGTCCGCGCGGTCGGTGAGCTCATGG AGAACCAGTTCCGTATCGGCCTGGTTCGCATGGAGCGCGCGATCAAGGAAAAGATGTCGGTCTACCAGGAGATGTCGACG GCGATGCCGCACGACCTCATCAACGCCAAGCCGGTCATGGCCGCGATCCGCGAGTTCTTCGGTTCTTCGCAGCTCTCGCA GTTCATGGATCAGACCAACCCCCTGTCCGAGATCACGCACAAGCGCCGCCTGTCGGCCCTTGGGCCTGGTGGTCTGTCCC GTGAGCGCGCCGGCTTCGAAGTCCGCGACGTTCACCCGACCCACTATGGCCGCATCTGCCCGATTGAGACGCCTGAAGGT CCGAACATCGGCCTGATCTCGTCGCTGTCGTGCTTTGCGCGCATCAACGAGTACGGCTTCATTGAGAGCCCGTACCGCCG CGTCAAGGATGGCCGCGTACTCGACTACGTCGCCGTCACCAACGCCGGTGAGTCCGGTCTGCGTCAGGGCGACTTCCTCG AGATCTCCGAATCGATCAAGCAGAACAAGGAGCTCAAGAAGAACGGCAAGCGCACGATGGACCTGGAGCCCTTCAGCTTC TATCTGTCGGCGTGGGAAGAGGATCGCCACACGATCGCTCAGGCCAACATCGAACTCGATGCTGAACTGAACATCGTGGA GGACCTGGTCAACGCGCGTAAGCAGGGCAACTTCGTACTCGTGCCCAAGGCCGAGGTCGACTATGTCGACGTCTCGCCGA AGCAGCTCGTATCGGTGGCCGCCTCGCTCGTTCCGTTCCTCGAGCATGACGATGCGAACCGCGCCCTGATGGGTGCGAAC ATGCAGCGCCAGTCCGTTCCGTTGCTCGTTGCCGAAGCTCCTTTCGTCGGCACCGGCATGGAAGGCGTTACAGCACGCGA CTCCGGCGCTGTGATCCTGGCCAAGCGCAACGGCATCATCGACTCGGTCGACTCCGAGCGCATCATCGTGCGCGTAGAAG GCGAGCACCACCCCACGCAGCTCTCGCGTGAGGTCGGTTCGGACATCTATCAGCTCACGAAGTTCAAGCGCTCCAACCAG AACACCTGCATCAACCAGAAGCCGATCGTTCGCAAGGGCGACCGTGTTCTCAAGGGTCAGGTGATCGCGGACGGTCCGTG CACGGAGCAGGGCGAGCTTGGTCTCGGCCGCAACGTGCTGGTTGCGTTTATGCCGTGGCGTGGTTACAACTTCGAGGACG CGATCCTCATCTCGGAAAAGCTGGTCCGCGAGGACTACTACACCTCGATCCACATCGAGGAGTTCGAGATCGAAGCGCGC GACACGAAGCTGGGGCCGGAAGAGATCACGCGTGATATCCCCAACGTCTCCGAGCACGCTCTGCGTGATCTGGACGAGTC GGGCATCATCCGTATCGGTGCCAAGATCGGCCACAACGACATCCTCGTCGGCAAGGTCACGCCCAAGGGCGAGACCCAGC TCACGCCGGAAGAGAAGCTGCTCCGCGCCATCTTCGGTGAAAAGGCCGGCGATGTTCGCGACGCTTCGCTGACGTGCCCT CCGGGCATCGAAGGCACGGTCGTCGATGTTCGCATCTTCTCGCGCAAGGGTCAGGAAAAGGACCAGCGCGCGTTGCAGAT CGAGCAGGAGATGGTCGAGAAGCTGGAGCGCAACCTCGCCGATGAGATTCGTATTCTCACCGACGAGCGCCTCAAGCGTC TCGAAGGCATCCTGGGAAGCAAGGAAGTTCTTGCCGACCTGCACGACGAGCGCACCAACAAGAAGCTGTTGAGCAAGGGC GACATTCTGACCCGCGACATCATCGAGCTGATCTCCACGCGTAACCTGAAGCGTATTCGCTACGCCGACAAGGATCCCCG CGTGAACGAGCAGATCGACGAGATCGAGGAGATGACCTCGCGCCAGATCGACGTACTGCGCAAGATCACCAACGAGAAGA TCGGCAAGATGCAGAAGGGCGATGAACTCTCGCCCGGTGTCATCAAGATGGTCAAGGTCTATATCGCGATGAAGCGCAAG CTTTCGGTCGGCGATAAGATGGCCGGACGCCACGGTAACAAGGGTGTTATCGCACGTATCCTCCCCGAGGAAGACATGCC GTATCTGCCCGATGGAACCCCGGTCGAGATCGTTCTGAACCCGCTCGGTGTGCCTTCGCGTATGAACGTCGGTCAGATTC TCGAAACGCACCTCGGATGGGCAGCACACGAGCTCGGCGCGAAGGTTGCCGCTCTCGCTGCGCAGCATCAGGAGGCCGGT GAAGTTCGCGAGATCTTCAAGGAAGCGTTCAAGAACACGGCAGCGCTCAACCAGCTTCTGACCCTCGACGACGAGCAGAC CATGCGCGTTGCCGCCGGTATGAAGCGCGGTATCTGGTTCGGCACGGCAGTGTTCGACGGCGCACGCGAGACGGAGATCA AGGCGCTGCTCGCAGCGGCCGGTCTCCCCAGCTCCGGCAAGAGCATGATGTTCGACGGCATGACGGGCGACCAGTTCGAA CAGCCCGTTACGGTCGGCTACATCTACATGCTCAAGCTGTCTCACCTTGTCGACGACAAGATTCACGCTCGCTCAATCGG GCCGTACTCGCTCATCACCCAGCAGCCGCTCGGTGGTAAGGCGCAGTTCGGCGGACAGCGCTTCGGTGAGATGGAAGTGT GGGCGCTTGAAGCTTATGGCGCCGCTTACATCCTGCAGGAGCTGCTCACCGCGAAGTCCGATGACGTCTATGGCCGTACC AAGATCTACGAGGCCATCGTCAAGGGTGAGGCCGCGATCGAACCGGGCGTGCCCGAGTCGTTCAACGTTCTCATCCGCGA GCTGCAGTCGCTTTGCCTCGATGTCGAGCTGGTCAAGAAGACCAGCACCGACGAATCAGAGGTCATCGCACTGCCCGAGC TTGCGGTCGCCGACTAG Protein sequence : MSNSTTNEMRAIRSRLDFSKIPTSIQIPNLIEVQRRSYERFLQMDKLPQEREDNGLQSVFTSVFPITDFRNVSELEFVDY SIGNWECKCGYLKGLNHLRTACTNCGHMVITDPFHPGDVLCKFCGTYNKNTPDFCTKCGDPVGLQLKYDQAECEERGMTY SAPLKVTIRLKIYDKDPETGVKSLRDMKEQEVFFGDIPLMSANGTFIVNGTERVIVSQLHRSPGVFFETANNRTYFLGKI IPYRGSWVEFEYDQKNTLYVRIDRKRKFLGTIFLRALGLRTDEEILKTFYTVDTINVKDGKLSWTVGAEEKPSHLVGTRS TAALNGADGKELVASGKKIGASALKHLRAGGVTSVEVETSEFDGAMIAADVIDMGTGELLYEANAELTADKLHKILQSGV ATFEVFFPERDDVGNIISNTLRRDSVRKPEEALIEIYRKLRPGDPPTLDTATALFEGMFFDPRKYDFSRVGRLKFNIKLY EDQDPSGLDKRTLTPEDFYGTIRYLLKLRKNIGVVDDIDHLGNRRVRAVGELMENQFRIGLVRMERAIKEKMSVYQEMST AMPHDLINAKPVMAAIREFFGSSQLSQFMDQTNPLSEITHKRRLSALGPGGLSRERAGFEVRDVHPTHYGRICPIETPEG PNIGLISSLSCFARINEYGFIESPYRRVKDGRVLDYVAVTNAGESGLRQGDFLEISESIKQNKELKKNGKRTMDLEPFSF YLSAWEEDRHTIAQANIELDAELNIVEDLVNARKQGNFVLVPKAEVDYVDVSPKQLVSVAASLVPFLEHDDANRALMGAN MQRQSVPLLVAEAPFVGTGMEGVTARDSGAVILAKRNGIIDSVDSERIIVRVEGEHHPTQLSREVGSDIYQLTKFKRSNQ NTCINQKPIVRKGDRVLKGQVIADGPCTEQGELGLGRNVLVAFMPWRGYNFEDAILISEKLVREDYYTSIHIEEFEIEAR DTKLGPEEITRDIPNVSEHALRDLDESGIIRIGAKIGHNDILVGKVTPKGETQLTPEEKLLRAIFGEKAGDVRDASLTCP PGIEGTVVDVRIFSRKGQEKDQRALQIEQEMVEKLERNLADEIRILTDERLKRLEGILGSKEVLADLHDERTNKKLLSKG DILTRDIIELISTRNLKRIRYADKDPRVNEQIDEIEEMTSRQIDVLRKITNEKIGKMQKGDELSPGVIKMVKVYIAMKRK LSVGDKMAGRHGNKGVIARILPEEDMPYLPDGTPVEIVLNPLGVPSRMNVGQILETHLGWAAHELGAKVAALAAQHQEAG EVREIFKEAFKNTAALNQLLTLDDEQTMRVAAGMKRGIWFGTAVFDGARETEIKALLAAAGLPSSGKSMMFDGMTGDQFE QPVTVGYIYMLKLSHLVDDKIHARSIGPYSLITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYILQELLTAKSDDVYGRT KIYEAIVKGEAAIEPGVPESFNVLIRELQSLCLDVELVKKTSTDESEVIALPELAVAD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB0868_00350 | YP_008211676.1 | DNA-directed RNA polymerase, beta subunit/140 kD subunit | Not tested | AbaR26 | Protein | 0.0 | 52 |
| BJAB07104_00346 | YP_008207811.1 | DNA-directed RNA polymerase, beta subunit/140 kD subunit | Not tested | AbaR25 | Protein | 0.0 | 52 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| AciX8_0788 | YP_005056167.1 | DNA-directed RNA polymerase subunit beta | CP000034.1.gene3741. | Protein | 0.0 | 54 |
| AciX8_0788 | YP_005056167.1 | DNA-directed RNA polymerase subunit beta | CP001138.1.gene4362. | Protein | 0.0 | 54 |
| AciX8_0788 | YP_005056167.1 | DNA-directed RNA polymerase subunit beta | CP001918.1.gene250.p | Protein | 0.0 | 54 |
| AciX8_0788 | YP_005056167.1 | DNA-directed RNA polymerase subunit beta | NC_002695.1.914942.p | Protein | 0.0 | 54 |
| AciX8_0788 | YP_005056167.1 | DNA-directed RNA polymerase subunit beta | CP000647.1.gene4402. | Protein | 0.0 | 54 |
| AciX8_0788 | YP_005056167.1 | DNA-directed RNA polymerase subunit beta | CP004022.1.gene2794. | Protein | 0.0 | 53 |
| AciX8_0788 | YP_005056167.1 | DNA-directed RNA polymerase subunit beta | NC_002516.2.881699.p | Protein | 0.0 | 53 |
| AciX8_0788 | YP_005056167.1 | DNA-directed RNA polymerase subunit beta | NC_008702.1.4609796. | Protein | 0.0 | 53 |
| AciX8_0788 | YP_005056167.1 | DNA-directed RNA polymerase subunit beta | CP000675.2.gene392.p | Protein | 0.0 | 53 |
| AciX8_0788 | YP_005056167.1 | DNA-directed RNA polymerase subunit beta | NC_009085.4918494.p0 | Protein | 0.0 | 52 |
| AciX8_0788 | YP_005056167.1 | DNA-directed RNA polymerase subunit beta | NC_010410.6003841.p0 | Protein | 0.0 | 52 |
| AciX8_0788 | YP_005056167.1 | DNA-directed RNA polymerase subunit beta | NC_011586.7046027.p0 | Protein | 0.0 | 52 |
| AciX8_0788 | YP_005056167.1 | DNA-directed RNA polymerase subunit beta | NC_010400.5987325.p0 | Protein | 0.0 | 52 |
| AciX8_0788 | YP_005056167.1 | DNA-directed RNA polymerase subunit beta | NC_010611.6233925.p0 | Protein | 0.0 | 52 |
| AciX8_0788 | YP_005056167.1 | DNA-directed RNA polymerase subunit beta | NC_011595.7060572.p0 | Protein | 0.0 | 52 |
| AciX8_0788 | YP_005056167.1 | DNA-directed RNA polymerase subunit beta | CP002695.1.gene18.p0 | Protein | 0.0 | 51 |
| AciX8_0788 | YP_005056167.1 | DNA-directed RNA polymerase subunit beta | NC_011035.1.6448762. | Protein | 0.0 | 51 |
