|
Name : SCc_466 (SCc_466) Accession : YP_005060623.1 Strain : Serratia symbiotica Cinara cedri Genome accession: NC_016632 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecD Function : - COG functional category : - COG ID : - EC number : - Position : 1034463 - 1036298 bp Length : 1836 bp Strand : + Note : - DNA sequence : GTGTTAAACCGTTATCCTTTATGGAAGTATCTTATGTTAATCATAGTTATCCTAATTGGGATAATTTATGCGCTTCCCAA TTTTTACGGCGAAAATTTAGCCTTACAAGTAACTGGTACTTACGGTTTATCTGTAAATAAAACTACGTTAGATCAAGTTA ATACCATATTAAAACAAAATCATATCGCAAACAAATCAATAACATTGAAAGATAGCATTATCTTAGTATGTTTTAATGAT TCCAATACTCAATTACGAGCTCATGAAACTTTAATAAGAGAGTTAGGTGATAAATTTATTGTTGCACTAAACTTATCTCC AGTTACGCCGTCATGGTTGACAATGCTGGGCGCTAAACCAATGAAGCTTGGCCTAGATCTACGCGGTGGTATGCACTTTC TGATGGAAGTAGACATAAAAAGCATAATTAGCAAGCTACAGGAGCAGACCGTAAGCGATTTGCGTAATATGCTACAAGAA AAATATATTCCTTACGTGTCTATACGTAAATTAGGCAAAAAGAACGTAGAAGTACGCTTCTCTAACGATATTACTCGTAA CAAGGCGATTAGATACATCAGTCAATATCAACATGATCTAATTTTGTATAGCAAAAATAATAATACACTAGAAGTGAACT TAGTAGATGCACGCCTAAGACAAGAACGTGAATATGCCGTGCAGCAAAATATTACTATTCTACGTAACCGAGTTAACCAA CTTGGTATTACTGAACCTTTAGTGCAACGACAGGGAGATAATTATATTATTGTTGAATTACCTGGCATTCAGGATACTGC ACGCGCTAAAGAAATCTTAGGTACAACTGCAACCCTAGAATTTCGTTTAGTCAATCCCAATACTACTACGAATAGTAAGG TACCTGATGATTCAGAAATAAAATATACCCGTGATATGCATCCGATGATGCTATACAAACATGCTATTCTCACCGGTGAC CACATAATAAATTCTACCTATAGTATTAACGAATACAACCAGCCACAAGTTAATATAACGCTAGACAATAAAGGTGGTGC CTTAATGTCTAACTTCACTAAGGACAATATAGGCAGGCTAATATCTACTCTCTTCGTAGAATATAAAGATAGCGGCAAAA AAGACACTAATGGTCGGGCAATTCTGGTAAAGCACGAAGAAATAATTAACGTAGCCAACATTCAATCAAGAATAGGTAAT AACTTCCGTATTACTGGTCTTGCAAATGCAAATGAAGCACATCAACTCGCATTATTTCTTCGTTCTGGCGCACTCAGGGC ACCAATGCAAATAATTGAAGAACGCATCATAGGACCAACTTTAGGGCATCAAAATATTACACAAGGCATAGAAGCGTGTG TATCAAGCATAATAGCTTCTATTATTTTCATGATTGCGTGGTATCGTATATTTGGCATAATTGCTACTATTGCGCTAATT ATTAACCTCGTATTAATTGTTAGTATTATGTCTCTTCTACCCGGAGTCACATTAACCATGCCAGGTATTGCTGGTATTCT CTTAATACTAGCGGTGGCAGTAGATGCTAATGTACTAATAAATGAACGTATCAAAGAAGAGCTAAAGAACGGACGCTCTG TTCAGCAAGCAATCCATGAAGGCTATAAAGGAGCCTTTTCTAGTATTATTGACGCTAATATCACAACCTTAATCACCGCA ATAATTTTATATACTATGGGAACTGGTTCGCTTAAAGGCTTTGCAATTACTACCATAATTGGTGTATTGACTTCCATGTT TACCACAATTATTGGTACTAGAGCTATCGTCAACCTACTTTACTGCGGCAAACATATTAATAAACTATCTATCTAG Protein sequence : MLNRYPLWKYLMLIIVILIGIIYALPNFYGENLALQVTGTYGLSVNKTTLDQVNTILKQNHIANKSITLKDSIILVCFND SNTQLRAHETLIRELGDKFIVALNLSPVTPSWLTMLGAKPMKLGLDLRGGMHFLMEVDIKSIISKLQEQTVSDLRNMLQE KYIPYVSIRKLGKKNVEVRFSNDITRNKAIRYISQYQHDLILYSKNNNTLEVNLVDARLRQEREYAVQQNITILRNRVNQ LGITEPLVQRQGDNYIIVELPGIQDTARAKEILGTTATLEFRLVNPNTTTNSKVPDDSEIKYTRDMHPMMLYKHAILTGD HIINSTYSINEYNQPQVNITLDNKGGALMSNFTKDNIGRLISTLFVEYKDSGKKDTNGRAILVKHEEIINVANIQSRIGN NFRITGLANANEAHQLALFLRSGALRAPMQIIEERIIGPTLGHQNITQGIEACVSSIIASIIFMIAWYRIFGIIATIALI INLVLIVSIMSLLPGVTLTMPGIAGILLILAVAVDANVLINERIKEELKNGRSVQQAIHEGYKGAFSSIIDANITTLITA IILYTMGTGSLKGFAITTIIGVLTSMFTTIIGTRAIVNLLYCGKHINKLSI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 6e-93 | 44 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 4e-93 | 44 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 4e-93 | 44 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 4e-93 | 44 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 3e-93 | 44 |
