Gene Information

Name : SpiGrapes_1204 (SpiGrapes_1204)
Accession : YP_005062031.1
Strain : Sphaerochaeta pleomorpha Grapes
Genome accession: NC_016633
Putative virulence/resistance : Resistance
Product : antimicrobial peptide ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1319395 - 1320069 bp
Length : 675 bp
Strand : -
Note : PFAM: ABC transporter

DNA sequence : 
ATGGCAAACAGTGTAATTCAGTTGCAAGATGTCAGACGCTATTTTCTTGTCGGGGACTATATCGTAAAAGCCCTCGACGG
GGTGAGTGTCGATATAAAAAGGGGGGAATTCACCTCCATCATGGGACCTTCCGGGAGTGGCAAGTCAACGATGATGAACC
TCATCGGTTGTCTTGATACGCCAACAAGTGGTTTGATCAATATAGATTCGGAGAATACCGCAGGCCTGAATGAGACCGAA
TTGGCCTATATCCGTAACCAAAAAGTCGGCTTTGTGTTCCAGCAGTTCAACCTGCTTGGCAAGATGACTGCCCTGGAAAA
TGTCATCACCCCGTTGCTCTATGCCGGGATGGGGGTCAAGGAACGCAAGCAACAGGCTATGCAGGCTTTGGAGCGGGTAG
GGCTTTCCGACCGTATGCACCACAGGCCAAACGAATTGTCAGGAGGCCAAAAGCAGCGCGTGGCAATTGCACGGGCGTTG
GTAAACAATCCAGCCATCCTGCTTGCCGATGAACCGACCGGGGCCCTCGACTCCAAGACAGGGAACCAGATAATGGAGCT
TTTTGAAGAGCTGAACAGTGAAGGCCGCACCGTGGTCTTTGTCACCCATGACCGAGAATTGGGAATGCGCTGTCTGCGCC
AGATCCGCATCCGCGACGGAAAGTTGGAGGAGTAG

Protein sequence : 
MANSVIQLQDVRRYFLVGDYIVKALDGVSVDIKRGEFTSIMGPSGSGKSTMMNLIGCLDTPTSGLINIDSENTAGLNETE
LAYIRNQKVGFVFQQFNLLGKMTALENVITPLLYAGMGVKERKQQAMQALERVGLSDRMHHRPNELSGGQKQRVAIARAL
VNNPAILLADEPTGALDSKTGNQIMELFEELNSEGRTVVFVTHDRELGMRCLRQIRIRDGKLEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 7e-31 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SpiGrapes_1204 YP_005062031.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7686878. Protein 3e-55 57
SpiGrapes_1204 YP_005062031.1 antimicrobial peptide ABC transporter ATPase NC_008702.1.4606598. Protein 8e-44 49
SpiGrapes_1204 YP_005062031.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene598.p Protein 8e-39 43
SpiGrapes_1204 YP_005062031.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7685735. Protein 5e-29 41