Gene Information

Name : ccmK (NIES39_A03150)
Accession : YP_005066692.1
Strain : Arthrospira platensis NIES-39
Genome accession: NC_016640
Putative virulence/resistance : Virulence
Product : carbon dioxide concentrating mechanism protein CcmK
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 311301 - 311651 bp
Length : 351 bp
Strand : -
Note : -

DNA sequence : 
ATGTCACAACAAGCAGTGGGCGCACTGGAAACGAAGGGGTTTCCAGGAATTTTGGCGGCAGCAGATGCAATGGTTAAAGC
AGGTCGTGTCACCCTAGTGGGCTATATTCGGGCGGGTAGCGCTCGGTTTACGGTGATGATACGAGGAGATGTTTCCGAGG
TGAAAACCGCTATGGATGCTGGTATTGCAGCGGTAGAGAAGGTATATGGGGGGGCTTTGGAAACTTGGGTAATTATTCCC
CGTCCTCATGAAAATGTCGTGGCTGTGCTTCCTATTGATTTTAGCGACGCGGTGGAAGAATATCGAGCTGCGGCTGAGGG
TTTGACTCTTCCTAGGGGTAACGCACGATAA

Protein sequence : 
MSQQAVGALETKGFPGILAAADAMVKAGRVTLVGYIRAGSARFTVMIRGDVSEVKTAMDAGIAAVEKVYGGALETWVIIP
RPHENVVAVLPIDFSDAVEEYRAAAEGLTLPRGNAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 3e-13 43
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 1e-11 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ccmK YP_005066692.1 carbon dioxide concentrating mechanism protein CcmK VFG1598 Protein 1e-13 43
ccmK YP_005066692.1 carbon dioxide concentrating mechanism protein CcmK VFG1596 Protein 5e-12 42