Gene Information

Name : ccmK (NIES39_K04820)
Accession : YP_005070665.1
Strain : Arthrospira platensis NIES-39
Genome accession: NC_016640
Putative virulence/resistance : Virulence
Product : carbon dioxide concentrating mechanism protein CcmK
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4372083 - 4372424 bp
Length : 342 bp
Strand : -
Note : -

DNA sequence :
ATGGCCATTGCAGTTGGCATGATAGAAACCCTGGGTTTTCCAGCGGTAGTAGAGGCAGCCGATTCCATGGTAAAAGCTGC
CCGCGTAACCTTAGTAGGCTACGAAAAAATCGGTAGCGGTCGTGTCACCGTCATTGTTCGCGGAGATGTGTCAGAAGTTC
AGGCTTCTGTCTCCGCCGGAACCGAGTCGGTGCGACGGGTAAATGGTGGGTTAGTTCTTTCCACCCATATTATTGCCCGT
CCCCATGAAAACCTAGAATATGTCCTACCAATTCGTTACACCGAAGCGGTAGAACAATTCCGTGAAAGCGTCGCCGGGAT
ACGTCCTCTTAACCGTCCGTAG

Protein sequence :
MAIAVGMIETLGFPAVVEAADSMVKAARVTLVGYEKIGSGRVTVIVRGDVSEVQASVSAGTESVRRVNGGLVLSTHIIAR
PHENLEYVLPIRYTEAVEQFRESVAGIRPLNRP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 4e-16 53
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 1e-14 52
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 3e-15 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ccmK YP_005070665.1 carbon dioxide concentrating mechanism protein CcmK VFG1596 Protein 2e-16 53
ccmK YP_005070665.1 carbon dioxide concentrating mechanism protein CcmK VFG1598 Protein 4e-15 52
ccmK YP_005070665.1 carbon dioxide concentrating mechanism protein CcmK VFG1597 Protein 1e-15 49