Gene Information

Name : ccmK (NIES39_K04830)
Accession : YP_005070666.1
Strain : Arthrospira platensis NIES-39
Genome accession: NC_016640
Putative virulence/resistance : Virulence
Product : carbon dioxide concentrating mechanism protein CcmK
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4372648 - 4372959 bp
Length : 312 bp
Strand : -
Note : -

DNA sequence : 
ATGTCCATCGCTGTTGGAATGATTGAAACCATAGGCTTTCCGGCTGTTGTAGAAGCAGCCGACTCCATGGTAAAAGCCGC
GCGCGTTACTTTAGTCGGATATGAGAAAATTGGCAGCGGTCGTGTGACCGTGATTGTCCGAGGAGATGTCTCCGAGGTAC
AAGCATCAGTTTCCGCTGGCATTGAGTCAGTCAAACGGGTGAATGGTGGAGAAGTATCATCAACCCACATCATTGCTCGT
CCCCATGAAAATCTAGAGTACGTTCTACCAATTCGTTACACCGATGCGGTCGAACAGTTCCGGTCCTACTAG

Protein sequence : 
MSIAVGMIETIGFPAVVEAADSMVKAARVTLVGYEKIGSGRVTVIVRGDVSEVQASVSAGIESVKRVNGGEVSSTHIIAR
PHENLEYVLPIRYTDAVEQFRSY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 5e-16 53
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 3e-17 53
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 2e-16 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ccmK YP_005070666.1 carbon dioxide concentrating mechanism protein CcmK VFG1598 Protein 2e-16 53
ccmK YP_005070666.1 carbon dioxide concentrating mechanism protein CcmK VFG1596 Protein 1e-17 53
ccmK YP_005070666.1 carbon dioxide concentrating mechanism protein CcmK VFG1597 Protein 8e-17 50