Gene Information

Name : HPL003_04465 (HPL003_04465)
Accession : YP_005073885.1
Strain : Paenibacillus terrae HPL-003
Genome accession: NC_016641
Putative virulence/resistance : Unknown
Product : cold shock cspc
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 936613 - 936810 bp
Length : 198 bp
Strand : -
Note : COG1278 Cold shock proteins

DNA sequence :
ATGCAAGGTAAAGTAAAATGGTTTAACGCAGAAAAAGGTTATGGTTTCATTGAAACTGCTGATGGCGGCGACGTATTCGT
TCATTTTTCCGCAATTCAAACAGAAGGCTTCAAAACACTTGAAGAAGGACAAGACGTGGAGTTCGACATTGTCGAAGGCG
CACGTGGACCACAAGCCGCTAACGTAACCAAATTATAA

Protein sequence :
MQGKVKWFNAEKGYGFIETADGGDVFVHFSAIQTEGFKTLEEGQDVEFDIVEGARGPQAANVTKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 5e-16 64
cspH YP_216241.1 cold shock protein-like protein Not tested SPI-11 Protein 5e-04 43