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Name : clpV (PSE_2855) Accession : YP_005081385.1 Strain : Pseudovibrio sp. FO-BEG1 Genome accession: NC_016642 Putative virulence/resistance : Virulence Product : type VI secretion ATPase, ClpV1 family Function : - COG functional category : - COG ID : - EC number : - Position : 3049297 - 3051891 bp Length : 2595 bp Strand : - Note : COG0542 DNA sequence : ATGCGCGGCAATCCCTATGTGGAGTTGGAACATTGGTTCCAGCAGCTTCTGAGTGCACAGGATTCAGATTTACACCGTAT CATTCGCGATGCGGGTATCGATGAGGCACGGCTTGCGTCGGATCTCACCAAGGCTTTGGACAAACTCCCGCGCGGCGCAA GTTCTGTCAGCGACCTTTCCCAACACGTGGAGGAAGCGGTTGAACGTGGCTGGGTTTATGCCACGCTGATGTTTGGCGAC AACGCCATCCGCAGTGGCTATCTCCTGATTGGCATTCTCAAGACCCCAGGCCTGCGCAACACCCTGTTTGGCATCTCTCG GTTGTTTGAGAACATATCTGCAGACGATACAGCAGCCCGTTACAAGAAGATTACGGAAGGCTCTCCTGAGGAAGGTAAAG CCAAGGATGGTACGCAACTGGATGCAGGTGAGCAACATGCTGCAGCTCCTGGATTAAAGACTGCAGATGAAGCCCTTGAT GCTTACTGCACGGATGTGACTGCCAAGGCAAAAGAAGGCCAGCTGGATCCTGTTATTGGCCGCGAAGAAGAAATCCGGCA GATCATTGATACGCTGATGCGCCGCCGCCAGAACAACCCTATCCTGACGGGTGAAGCCGGTGTTGGTAAAACTGCTGTTG TTGAAGGTCTGGCGATCCGCATTGCAGAGGGCGATGTGCCACCGTCCATCAAAGACGTTCGTGTTCTGCTGCTGGATGTG GGTCTGCTTCAGGCCGGTGCTGGTGTTAAAGGTGAGTTTGAAGATCGTCTGCGCAAGATTTTGGATGCGGTTCGCTCCTC TGTACAGCCGATTATTCTGTTCATCGACGAAGCCCATACACTGATTGGTGCTGGTGGCGCCGCTGGTACCGGTGATGCCG CGAACCTGCTGAAACCGGCTTTGGCTCGTGGTGAGTTGCGGACGATCGCGGCGACCACATGGTCAGAATACAAGAAGCAT ATTGAGAAAGACCCAGCTCTTGCTCGCCGGTTCCAGAACATTCTGGTTGAAGAGCCAGATCCGGATAAAGCCGTTGCCAT TATGCGTGGAGTAGCAGCAATGCTTGAAAAGCACCATCAGGTGCAGATCCTTGATGAAGCATTGGAAGCTGCAGTTCACC TTTCCATGCGCTTTATTCCAGCTCGGCAATTGCCCGACAAAGCAATCAGTTTGATTGATACGGCCTGTGCCCGCGTTGCC CTTTCCCAACACGCCACACCGGCAGCAGTGGATGATTGCCGAAAGCGGCAAGTGATGGTGGAGACAGAGCGAGACATTCT GGAACGCGAGTCTCAATCTGGTTTTGATGTAGGTGAGAAGCTCACCGACGTTAAAAAGAAACTGACCGAACTTGAGAAAG AACGCGAAGGTCTAGAAGCTGAGTGGATCAAAGAGCAAACGCTCGTTGGGGACATTCTGAAACTACGTGAGGTATTCCGC CAAACCAATGGCGATGAGAATGCCGATACAGCGCCAGTTAAGAAAGAGCTCGACGAGAAACTAGAAGAGCTGACGGAGCT TCAAGGCGAGCATCCGCTCATTTTGCCAGAGGTAGACGCTCAGGCGGTTGCCACCATTGTTTCTGACTGGACTGGCATTC CAACAGGCCGAATGGTTTCCAATGAAATCAACACCGTCCTCCATCTGAGCGATATTCTGCGCAAGCGGATTATTGGTCAG GACCATGCGATGGAAGTAATTGCACGCCGTGTGAAGACCTCCCGCGCCAATCTGGATAATCCAAGCCGCCCAATCGGTGT TTTCCTGCTTGTGGGTCCAAGTGGTGTCGGTAAGACTGAAACCGCTCTGGCCCTTGCCGAGACGCTTTATGGCGGAGAAC AGAACCTCATTACAATCAACATGAGTGAGTTTCAGGAGAGCCATACTGTTTCGACTCTGAAGGGCTCACCTCCGGGTTAT GTGGGTTACGGTGAAGGCGGCGTTCTGACAGAAGCTGTGCGCCGCAGACCTTATAGCATCGTGCTGCTTGATGAGGTTGA GAAGGCCCACCCAGATGTGCACGAGCTGTTCTTCCAGGTTTTTGATAAAGGTATGATGGAAGATGGTGAAGGGCGGAAGA TCAACTTCAAGAACACGCTGATCCTTCTCACCGCGAACGTGGGCAGTGATCTCATACTGGATATGTGTGCTGACGAAGAT CTGGTGCCGGATCCGGATGGCATTGCCAAGGCTTTGAGACCTCCGCTTCTCAAGGCCTTCCCAGCCGCCTTGCTCGGTCG TCTTGTGACTGTGCCTTACTACCCACTCAGCTCACCAGTTATTCATAAGATCATCAACCTGCAGCTTGGCCGCATTGGTG ATCGTATTCTTGAGAACCACAATGTGAAGTTCACCTGGGATGACTCTGTTGTGAAGCTGATTGAAAGCAGGTGTGCTGAG ATTGAGAGTGGTGGCCGCATGATTGATGCGATCCTGACCAACACGCTGCTGCCTGATATCAGCACCGAGTTCCTCAAGAA CATGAGCGAAGACAAGAAGATCACAGAGCTCAAAGTGCATACAGATGGTGATGCCTTTGACTACAAGTTCAAGAAGTCAC CTGTGGCGAAAAAGGATAAGCATAAGAAGAAGTGA Protein sequence : MRGNPYVELEHWFQQLLSAQDSDLHRIIRDAGIDEARLASDLTKALDKLPRGASSVSDLSQHVEEAVERGWVYATLMFGD NAIRSGYLLIGILKTPGLRNTLFGISRLFENISADDTAARYKKITEGSPEEGKAKDGTQLDAGEQHAAAPGLKTADEALD AYCTDVTAKAKEGQLDPVIGREEEIRQIIDTLMRRRQNNPILTGEAGVGKTAVVEGLAIRIAEGDVPPSIKDVRVLLLDV GLLQAGAGVKGEFEDRLRKILDAVRSSVQPIILFIDEAHTLIGAGGAAGTGDAANLLKPALARGELRTIAATTWSEYKKH IEKDPALARRFQNILVEEPDPDKAVAIMRGVAAMLEKHHQVQILDEALEAAVHLSMRFIPARQLPDKAISLIDTACARVA LSQHATPAAVDDCRKRQVMVETERDILERESQSGFDVGEKLTDVKKKLTELEKEREGLEAEWIKEQTLVGDILKLREVFR QTNGDENADTAPVKKELDEKLEELTELQGEHPLILPEVDAQAVATIVSDWTGIPTGRMVSNEINTVLHLSDILRKRIIGQ DHAMEVIARRVKTSRANLDNPSRPIGVFLLVGPSGVGKTETALALAETLYGGEQNLITINMSEFQESHTVSTLKGSPPGY VGYGEGGVLTEAVRRRPYSIVLLDEVEKAHPDVHELFFQVFDKGMMEDGEGRKINFKNTLILLTANVGSDLILDMCADED LVPDPDGIAKALRPPLLKAFPAALLGRLVTVPYYPLSSPVIHKIINLQLGRIGDRILENHNVKFTWDDSVVKLIESRCAE IESGGRMIDAILTNTLLPDISTEFLKNMSEDKKITELKVHTDGDAFDYKFKKSPVAKKDKHKKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 2e-174 | 52 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 4e-108 | 42 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 3e-108 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpV | YP_005081385.1 | type VI secretion ATPase, ClpV1 family | VFG2076 | Protein | 0.0 | 63 |
| clpV | YP_005081385.1 | type VI secretion ATPase, ClpV1 family | VFG2084 | Protein | 5e-133 | 43 |
