Gene Information

Name : GU3_06510 (GU3_06510)
Accession : YP_005091808.1
Strain : Oceanimonas sp. GK1
Genome accession: NC_016745
Putative virulence/resistance : Unknown
Product : preprotein translocase subunit SecD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1405251 - 1407104 bp
Length : 1854 bp
Strand : +
Note : COG0342 Preprotein translocase subunit SecD

DNA sequence :
GTGTTGAATCGATATCCGCTGTGGAAATACTTGATGGTGATCCTGGTGATCACCATCAGTTTTCTTTATGCAGCACCCAA
CCTGTTTGGTGAAGATCCGGCGCTTCAGGTGTCCGGCAGCCGCGGTACCCAGGTTTCTTCCGACATTCTGGTCAAGGCCC
AGCAGAGCCTCAGCCAGGCCGGCATTGAGGTAAAGAGCGCCGCCCTGGAAAACGACCAGCTTCTTATTCGTTTTAGCAAT
ACCGACGACCAGCTCAGGGGCAAGGATCTGGTTGCCGAGGTGCTGGGTGACGATTACATCACCGCCCTCAACCTGGCCCC
GTCCACCCCCGCCTGGCTGGAAGCCATCGGTGCCGGCCCGCTTAAGCTGGGTCTGGATTTGCGCGGCGGCGTGCACTTCC
TGATGGAAGTGGACATGGACGAGGCCTTGAACCGCGTGCAGGAGCAGACGGTACAGGACTTTCGCACCGAGCTGCGCCAG
GAGCGGCTGCGCTACTCCGGCGTGCTGAGCCGGGACGGCGGTACTCAGGTGGTATTCCGTGACGCCGATACCCGCGACAA
GGCCATCAGCCATTTGCGCCAGCGCTATCCCGAGCTGGTGTTTACCACTCAGGATAACGGCGACAGCTTTGGCCTGTTGG
CGGTGATGAGCGAGCAGCGGCTGAAGGAAGTGAAGGAATACGCCCTGCAGCAGAACATCACCATTATTCGCAACCGGGTC
AACGAGCTGGGCGTGGCCGAGCCGCTGGTACAGCGCCAGGGCGCCGACCGCATTGTGGTGCAGTTGCCGGGTATTCAGGA
TACCGCCCGGGCCAAGGAAATCCTCGGCGCCACCGCCACCCTGGAATTCCGCCTGGTGGACGAGCGCGCCGATGCCGCCG
CCGCGGCGGCGGGCAGAGTGCCGCCGGGCAGCGAGCTGTTTACCGATCGTAACGGCCGGGCGGTGGTGCTGCAGCAGCGG
GTCATCCTTACCGGTGAACACATCGTCGATGCCAACTCCGGCATGGACGAGTTCAGCCGGCCCCAGGTGAACATCAGCCT
GGATGCCCCCGGTGGCAGCCGCATGGCCGACTTCACCAAGGACAACGTGGGCCGGGCCATGGCCACGGTATTTACCGAGT
ACAAGCCCGCCACCGAGCCCGGTGTCGATGGCAAGCCGAGTCTGCGCAAGGAGCAGGAAGTCATCAACGTGGCCACCATT
CAGTCCCGGCTGGGCCGCAGTTTCCGCATCACCGGCATCGACTCCATGGCCGAGGCCCAGAACCTGGCCCTGCTGCTGCG
CGCCGGTGCCCTGATTGCGCCCATTCAGATTGTGGAGGAGCGCACCATAGGCCCGAGCCTGGGGCAACAGAACGTGGAAA
ACGGCCTGATGGCCATGATCTATGGCCTGCTGGCGGTGGTGCTGTTTATGGCCATTTATTACCGCAAGTTCGGCCTGGTG
GCCAATCTGGCGCTGCTGGCCAATCTGGTGATCATTATTGGGGTCATGTCCATGGTGCCGGGGGCGACCATGACCCTGCC
GGGCATTGCCGGCATCGTGCTCACCATCGGCATGTCGGTGGATGCCAATGTGCTGATCTTCGAGCGTATCCGCGAGGAGT
TGCGGGACGGGCGCAGTGTGCAGCAGGCCATTCACATGGGCTATGAAAAGGCCTTTGCCACCATTACCGATGCCAACATC
ACCACCTTTATCACCGCCATCATTCTGTTTGCGGTCGGCACCGGCCCCATCAAGGGCTTTGCCGTGACCCTGATGATCGG
CATTCTGGCTTCCATGTTTACCGCCATTGTCGGTACCCGGGCCCTGGTCAACCTGCTCTGGGGCGGCAAACGTCTCAAGA
AGCTGTCGATATGA

Protein sequence :
MLNRYPLWKYLMVILVITISFLYAAPNLFGEDPALQVSGSRGTQVSSDILVKAQQSLSQAGIEVKSAALENDQLLIRFSN
TDDQLRGKDLVAEVLGDDYITALNLAPSTPAWLEAIGAGPLKLGLDLRGGVHFLMEVDMDEALNRVQEQTVQDFRTELRQ
ERLRYSGVLSRDGGTQVVFRDADTRDKAISHLRQRYPELVFTTQDNGDSFGLLAVMSEQRLKEVKEYALQQNITIIRNRV
NELGVAEPLVQRQGADRIVVQLPGIQDTARAKEILGATATLEFRLVDERADAAAAAAGRVPPGSELFTDRNGRAVVLQQR
VILTGEHIVDANSGMDEFSRPQVNISLDAPGGSRMADFTKDNVGRAMATVFTEYKPATEPGVDGKPSLRKEQEVINVATI
QSRLGRSFRITGIDSMAEAQNLALLLRAGALIAPIQIVEERTIGPSLGQQNVENGLMAMIYGLLAVVLFMAIYYRKFGLV
ANLALLANLVIIIGVMSMVPGATMTLPGIAGIVLTIGMSVDANVLIFERIREELRDGRSVQQAIHMGYEKAFATITDANI
TTFITAIILFAVGTGPIKGFAVTLMIGILASMFTAIVGTRALVNLLWGGKRLKKLSI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
secD AAT96103.1 SecD Not tested T-PAI Protein 3e-119 49
secD AAT96179.1 SecD Not tested T-PAI Protein 2e-118 49
secD AAT96039.1 SecD Not tested T-PAI Protein 1e-118 49
secD AAT96067.1 SecD Not tested T-PAI Protein 1e-118 49
secD AAT96119.1 SecD Not tested T-PAI Protein 1e-118 49