Gene Information

Name : glcF (GU3_02065)
Accession : YP_005090920.1
Strain : Oceanimonas sp. GK1
Genome accession: NC_016745
Putative virulence/resistance : Unknown
Product : glycolate oxidase iron-sulfur subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 425664 - 426878 bp
Length : 1215 bp
Strand : +
Note : COG0247 Fe-S oxidoreductase

DNA sequence :
ATGCGTACAGACATTCATGTGAAATACCTGGATCACCCCGACATTGAAGAAGCCGAGTCCATTCTGCGCAGCTGCGTGCA
CTGCGGTTTCTGCACCGCCACCTGCCCCACCTATCAGCAACTGGGGGACGAACGGGACGGTCCGCGCGGACGCATTTATC
TGATCAAGCAGATGCTGGAAAGCGGCGAGATCAGCGACAAATCCCAGACCCACCTGGATCGCTGCCTGACCTGCCGCAGC
TGCGAAACCACCTGCCCGTCCGGCGTGCGTTACGGCCGGCTGGCGGACATAGGCCGGGGCATCATGGAGCAGCAGCTGCC
GCGCTCACCGGGCCAGCGCCTGCTGCGCTGGCTGCTGCGTAAGGTGCTGCCGTTTCCGGCCCGGCTGCGCCCGCTGCTGG
TGCTGGGACGTATCGGCCAGCCCTTGCTGCCAAAGGCGCTGGCCGCCAAGGTGCCCACCGCACAACCGGCCGGTATCCTG
CCCGACCGTGATCACCCGCGGGTGATGCTGGCACTGGGCGGCTGCGCCCAGGCGGCGGCCACCCCCAATACCAATGCGGC
GGCGGCCCGGGTACTGGACCGGCTTGGCATTCACCTGCGGCAGGCCCCCGAGGCCGGCTGCTGCGGCGCGGTCAGCTATC
ACCTCTCGGCCCATGAGGAAGGGCTAGATTTCATGCGTCGCAACATCGACGCCTGGTGGCCCGATATTCAGGCCGGCGCC
GAGGCTGTGGTGATCAGCGCCTCCGGCTGCGGCGCCATGGTCAAGGAGTACGGCGACCGGCTGGCTCAGGATCCGGCCTA
CGCCGCCAAGGCGCGCCGGGTCAGTGAATTGGCCCGGGATCTGAGCGAGGTGCTGGGGCAGGAAGATCTCGGCAAACTGC
AACTGGCCGATAAAGGCCGCAGAACCGCGGTGCACTGCCCCTGCACCCTGCAACACGCCCTTGGCCTCGGCGGCCAGGTC
GAGACCATATTACGCCGGGCGGGGCTGGAGCTGGCCCCGGTGCGGGACGGCCATCTGTGCTGCGGCTCGGCGGGCACCTA
TTCGGTGTTGCAGCCGGAGCTCAGCCAGCAGTTACTCGGCAACAAGCTGGCGGCCCTGACCGAGGGCAACCCCGAGCAGA
TCGTCACCGCCAACGTCGGTTGCCAGCTGCACCTGGCCAGCAAATCGACGGTGCCGGTGAAGCACTGGATTGAGCTGCTC
GACCCCGGCGCCTGA

Protein sequence :
MRTDIHVKYLDHPDIEEAESILRSCVHCGFCTATCPTYQQLGDERDGPRGRIYLIKQMLESGEISDKSQTHLDRCLTCRS
CETTCPSGVRYGRLADIGRGIMEQQLPRSPGQRLLRWLLRKVLPFPARLRPLLVLGRIGQPLLPKALAAKVPTAQPAGIL
PDRDHPRVMLALGGCAQAAATPNTNAAAARVLDRLGIHLRQAPEAGCCGAVSYHLSAHEEGLDFMRRNIDAWWPDIQAGA
EAVVISASGCGAMVKEYGDRLAQDPAYAAKARRVSELARDLSEVLGQEDLGKLQLADKGRRTAVHCPCTLQHALGLGGQV
ETILRRAGLELAPVRDGHLCCGSAGTYSVLQPELSQQLLGNKLAALTEGNPEQIVTANVGCQLHLASKSTVPVKHWIELL
DPGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glcF CAE85243.1 GlcF protein Not tested PAI V 536 Protein 2e-104 60