Gene Information

Name : glcF (BSVBI22_B0178)
Accession : YP_005108198.1
Strain :
Genome accession: NC_016775
Putative virulence/resistance : Unknown
Product : glycolate oxidase, iron-sulfur subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 166296 - 167597 bp
Length : 1302 bp
Strand : +
Note : similar to SP:P52074; identified by sequence similarity; putative

DNA sequence :
ATGCAGACCCATTTCAGCCCTGAACAATTGCGCGATCCCGGCGTGCTTGAAGCCGAAAAGATTTTGCGCAAATGTGTGCA
TTGCGGTTTCTGCACCGCGACCTGCCCGACCTATGTGACGCTCGGCAACGAACTCGACAGCCCGCGCGGGCGCATCTATC
TCATCAAGGACATGCTGGAAAACGGCCGCCCGGCGGATGAGGAGATCGTGCGCCATGTGGACCGCTGCCTCTCGTGCCTG
GCCTGCATGACCACATGCCCGTCCGGCGTCAATTATATGCATCTGGTCGATCATGCCCGCGCGCATATTGAAAAGACCTA
TAAGCGCCCCTTCATGAACCGCCTGCTGCGGTCGGTTCTGGCGCAGGTTCTGCCCTATCCGGCGCGGTTTCGCCTGGCGT
TGAAACTTGCAAAATTGGGCAAGCCTTTCGCTTCCCTGTTTCGTAAAAGTCCGGTTCTGCGGCCTGTGGCTGCAATGCTG
GACCTTGCACCGCAGAGCCTGCCGGCAATGCCTGCCGCCACCAATGCGGTCAGGGGCGAAAAGCGCGGCCGGGTCGCAAT
CCTTAACGGATGCGCGCAGCCGGTGCTCAATCCCGGCATCAATGCCGCAACCCTGCGCCTTCTCAATCGTTTCGACATCG
AAGTGGCAACGCCCAAGGGCGAGGGATGCTGTGGCTCGCTGGTCCACCATATGGGCCGTGAGGAACAGGCGCTCGAACAG
GCGCGCCACAATGTCGATGTGTGGACGCGCGAGATTGAAACAGGTGGGCTGGACGCGATCATCGTGACGGCCTCAGGCTG
TGGCACGACGATCAAGGATTACGGCTATATGCTGCGTCTTGATCCTGCCTATAAGGATAAGGCGGCGCGCGTATCGGCAC
TTGCGAAGGATATCACGGAATATCTCGCCACGCTGGAACTGCCGGAACCCGATGCGCCGAAGACATTGACGGTTGCCTAT
CATTCGGCCTGCTCCATGCAGCACGGCCAGAAAATCGTGCGCGAGCCGAAGGATTTGCTGGTGAAGGCCGGTTTTACAGT
AAAGGAACCGCTGGAAGGGCATCTTTGCTGCGGCTCGGCTGGCACCTACAATATCATGCAGCCGGAAATCGCCACGAAGC
TGCGCGACCGCAAGGTGAAGAATATCGAGGCAACCGGGGCTGCCCTGATCGCCACTGGCAATATCGGCTGCATGACGCAG
ATCGCAACCGGCAGCGACCTTCCTATCGTTCATACGGTGGAACTGATCGATTGGGCCTATGGCGGGCCCACCCCGCAAGC
ACTCGAGAAAGCAGGGGCTTGA

Protein sequence :
MQTHFSPEQLRDPGVLEAEKILRKCVHCGFCTATCPTYVTLGNELDSPRGRIYLIKDMLENGRPADEEIVRHVDRCLSCL
ACMTTCPSGVNYMHLVDHARAHIEKTYKRPFMNRLLRSVLAQVLPYPARFRLALKLAKLGKPFASLFRKSPVLRPVAAML
DLAPQSLPAMPAATNAVRGEKRGRVAILNGCAQPVLNPGINAATLRLLNRFDIEVATPKGEGCCGSLVHHMGREEQALEQ
ARHNVDVWTREIETGGLDAIIVTASGCGTTIKDYGYMLRLDPAYKDKAARVSALAKDITEYLATLELPEPDAPKTLTVAY
HSACSMQHGQKIVREPKDLLVKAGFTVKEPLEGHLCCGSAGTYNIMQPEIATKLRDRKVKNIEATGAALIATGNIGCMTQ
IATGSDLPIVHTVELIDWAYGGPTPQALEKAGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glcF CAE85243.1 GlcF protein Not tested PAI V 536 Protein 4e-81 43