Gene Information

Name : BAA13334_II00421 (BAA13334_II00421)
Accession : YP_005113723.1
Strain :
Genome accession: NC_016777
Putative virulence/resistance : Virulence
Product : flagellar protein export ATPase FliI
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 275824 - 277185 bp
Length : 1362 bp
Strand : +
Note : -

DNA sequence :
ATGACGCCTGATCTGCCACTTACCCGCCTTGCTGCTTTTGTTCGCCAGCAAACAATAGCGCCAGAGCCGCTCACCGGTAT
CGGGGGCACGGTGAGTGACGTTTCGCGTTCGTCTATTGCAGTGCGTGGCCTTTCGCGCGATGCGCGGCTTGGCGATACGG
TGGCAATCCGCGCTGGCGAGGGGGCGCCGAGCCTTGCCGAAATCATCCGTGTTGCCGATTTGCAGGTGCTGGTGAAACCG
TTCGATGACCGGATCATGCCTTCGCTGGGGGCAGCGGTTTTCGAGGAAGGCCCGTTGCGCATCCGCCCGGCGCCGGAATG
GCGGGGCCGGGTCATCAATGCGCTTGGAAATGCCATTGACGGAAAGGGCGCGCTGAAACCGGGCACCCGCCCCATGGCGG
CAGAAAGCCTTGCTCCGGCGGCTTTGCGCCGTGCGCGGGTGGATCGCGGCTTGCGTACCGGCGTTAATGTGATCGATATT
TTCACGCCGCTCTGTTTTGGCCAGCGCATCGGCATTTTCGCAGGCTCCGGTGTCGGCAAATCAACGCTTCTCGCCATGAT
GACGCGCGCTGCCGATTTCGATACGGTCGTGCTGGCGCTGACGGGCGAGCGCGGGCGCGAAGTGCGCGAAATGCTGGAAG
AAACCATGGCCGGGCATTTGGGCAAGACCATAACTGTGGTGGCGACCGGCGATGAAAGCCCGATGATGCGCCGCCTTGCG
CCCAATACGGCGACGGCGATTGCCGAATATTTCCGCGATCTTGGCCAGAATGTTCTGTTGATCGTCGATTCCGTCACACG
CTTTGCCCATGCGGCACGCGAAGTGGCCATTGCTGCCGAGGAGCCGCCGGTTGCACGCGGTTATCCGCCAAGTGTTTTCA
GCCAGTTGCCCCGCCTTCTGGAGCGTGCCGGTCCCGGCAGTGCCGAAGCGGGTGGCAGCATCACCGGTATTTATTCCGTG
CTGGTGGATGGTGACGATCATAACGATCCGGTTTCCGATACTATTCGCGGAACGCTGGACGGCCACATTGTGCTCGACCG
CGCCATTGCCGCGCAGGGGCGCTTTCCGGCGGTGGATATTCCGGCTTCCGTTTCGCGCCTTGCCAAACACAACTGGACGC
CGGAACAGCGTAAGCTGGTGATGCAATTGCGCAGCATGGTTGCCCGGTTCGAGGAAACGCGCGACCTGCGCGCCATTGGC
GCTTATCAGAAAAGCCATGACGGGCTTCTGGACCAGGCGGTCGATTTTGTGCCGCGTATTTATGAAGCTTTACAGCAATC
ACCGGAAACCGGCCTATCGGACGATCCCTATAACGACCTTGCCGCAGCATTGCGCGGTGACAGACAGGCGCAAAACGCAT
GA

Protein sequence :
MTPDLPLTRLAAFVRQQTIAPEPLTGIGGTVSDVSRSSIAVRGLSRDARLGDTVAIRAGEGAPSLAEIIRVADLQVLVKP
FDDRIMPSLGAAVFEEGPLRIRPAPEWRGRVINALGNAIDGKGALKPGTRPMAAESLAPAALRRARVDRGLRTGVNVIDI
FTPLCFGQRIGIFAGSGVGKSTLLAMMTRAADFDTVVLALTGERGREVREMLEETMAGHLGKTITVVATGDESPMMRRLA
PNTATAIAEYFRDLGQNVLLIVDSVTRFAHAAREVAIAAEEPPVARGYPPSVFSQLPRLLERAGPGSAEAGGSITGIYSV
LVDGDDHNDPVSDTIRGTLDGHIVLDRAIAAQGRFPAVDIPASVSRLAKHNWTPEQRKLVMQLRSMVARFEETRDLRAIG
AYQKSHDGLLDQAVDFVPRIYEALQQSPETGLSDDPYNDLAAALRGDRQAQNA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 1e-56 45
escN AAC38383.1 EscN Virulence LEE Protein 2e-54 44
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 3e-53 43
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 3e-53 43
escN NP_290268.1 hypothetical protein Virulence LEE Protein 3e-54 43
ECs4568 NP_312595.1 EscN Virulence LEE Protein 3e-54 43
escN AAC31513.1 L0034 Virulence LEE Protein 2e-54 43
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 2e-54 43
lscN AAO18044.1 LscN Virulence TTSS locus Protein 2e-55 42
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 2e-51 42
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 2e-51 42
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 2e-51 42
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 4e-52 42
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 5e-52 42
escN CAI43874.1 EscN protein Virulence LEE Protein 3e-54 42
escN YP_003223475.1 translocator EscN Virulence LEE Protein 5e-54 42
hrcN AAT96339.1 HrcN Virulence S-PAI Protein 2e-45 42
hrcN AAT96258.1 HrcN Virulence S-PAI Protein 1e-45 42
hrcN AAT96299.1 HrcN Virulence S-PAI Protein 4e-46 42
escN AAK26715.1 EscN Virulence LEE Protein 5e-54 42
escN AAL57542.1 EscN Virulence LEE Protein 5e-54 42
escN YP_003236088.1 translocator EscN Virulence LEE Protein 1e-54 42
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 2e-44 41
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-57 41
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-57 41
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 3e-57 41
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 4e-57 41
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 4e-51 41
escN CAC81862.1 EscN protein Virulence LEE II Protein 5e-54 41
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 8e-54 41
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 2e-45 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BAA13334_II00421 YP_005113723.1 flagellar protein export ATPase FliI VFG0730 Protein 1e-54 44
BAA13334_II00421 YP_005113723.1 flagellar protein export ATPase FliI VFG0812 Protein 1e-54 43
BAA13334_II00421 YP_005113723.1 flagellar protein export ATPase FliI VFG2331 Protein 4e-56 43
BAA13334_II00421 YP_005113723.1 flagellar protein export ATPase FliI VFG0390 Protein 3e-56 42
BAA13334_II00421 YP_005113723.1 flagellar protein export ATPase FliI VFG0048 Protein 7e-52 42
BAA13334_II00421 YP_005113723.1 flagellar protein export ATPase FliI VFG0515 Protein 2e-52 42
BAA13334_II00421 YP_005113723.1 flagellar protein export ATPase FliI VFG0192 Protein 8e-57 41
BAA13334_II00421 YP_005113723.1 flagellar protein export ATPase FliI VFG2144 Protein 1e-58 41