Gene Information

Name : CDHC03_0408 (CDHC03_0408)
Accession : YP_005137457.1
Strain : Corynebacterium diphtheriae HC03
Genome accession: NC_016787
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 407946 - 408662 bp
Length : 717 bp
Strand : +
Note : -

DNA sequence : 
ATGGCAGAGCAACTGATCAAGATGCGCGGGATTGTTAAGCGCTTTAACATCGGGCAACCCGGCGAATTGCAGGTGCTGCA
TGGCTGCGATTTCGACGTCACGGAAGGTGAATTTGTTTCCGTGGTTGGTACGTCTGGCTCGGGTAAGTCCACGTTGATGA
ATATCGTGGGGCTTCTCGACCGCCCAACCGCCGGCAGCTACCTTTTTAACGGCGTGAATGTGCTGGAAAGCAACGACGAT
GAGCTTTCGCGCTACCGTAGTAAGAGTATTGGGTTTGTGTTTCAGAACTTCAACCTCATCGGGCGTATCGACGCCCTAAA
AAACGTTGAGCTGCCCATGATGTACGCGGGTGTGAGCCGTAAAGAACGGCAAACACGGGCGGAGGAGCTTTTGGAGCTTG
TCGGTATGGCCGATCGTATGCACCACCAGCCCAATGAGCTTTCCGGCGGACAAAAGCAACGTGTTGCCATCGCGCGCGCA
TTAGCGAACGACCCGCACCTTTTGCTTGCCGACGAACCCACCGGTGCCCTTGATACCGCAACCGGCAGGGTAGTGATGGA
CCTGTTTCATACGCTTAATCAAGAACATGGGAAGACCATTGTGTTTATTACCCACAACCCCGAGCTAGCTGCCGAAACTA
CTCGGGTAGCTACTATGCGTGACGGCATGTTTGTTGACGAAGATATCTTTCACTTTCATACGACGGGGCAACAATGA

Protein sequence : 
MAEQLIKMRGIVKRFNIGQPGELQVLHGCDFDVTEGEFVSVVGTSGSGKSTLMNIVGLLDRPTAGSYLFNGVNVLESNDD
ELSRYRSKSIGFVFQNFNLIGRIDALKNVELPMMYAGVSRKERQTRAEELLELVGMADRMHHQPNELSGGQKQRVAIARA
LANDPHLLLADEPTGALDTATGRVVMDLFHTLNQEHGKTIVFITHNPELAAETTRVATMRDGMFVDEDIFHFHTTGQQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-26 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CDHC03_0408 YP_005137457.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 5e-50 53
CDHC03_0408 YP_005137457.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 6e-36 46
CDHC03_0408 YP_005137457.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 2e-34 41
CDHC03_0408 YP_005137457.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 7e-29 41