Gene Information

Name : CDHC04_0390 (CDHC04_0390)
Accession : YP_005139701.1
Strain : Corynebacterium diphtheriae HC04
Genome accession: NC_016788
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 397016 - 397732 bp
Length : 717 bp
Strand : +
Note : -

DNA sequence : 
ATGGCAGAGCAACTGATCAAGATGCGCGGGATTGTTAAGCGCTTTAACATCGGGCAACCCGGCGAATTGCAGGTGCTGCA
TGGCTGCGATTTCGACGTCACGGAAGGTGAATTTGTTTCCGTGGTTGGTACGTCTGGCTCGGGTAAGTCCACGTTGATGA
ATATCGTGGGGCTTCTCGACCGCCCAACCGCCGGCAGCTACCTTTTTAACGGCGTGAATGTGCTGGAAAGCAACGACGAT
GAGCTTTCGCGCTACCGTAGTAAGAGTATTGGGTTTGTGTTTCAGAACTTCAACCTCATCGGGCGTATCGACGCCCTAAA
AAACGTTGAGCTGCCCATGATGTACGCGGGTGTGAGCCGTAAAGAACGGCAAACACGGGCGGAGGAGCTTTTGGAGCTTG
TCGGTATGGCCGATCGTATGCACCACCAGCCCAATGAGCTTTCCGGCGGACAAAAGCAACGTGTTGCCATCGCGCGCGCA
TTAGCGAACGACCCGCACCTTTTGCTTGCCGACGAACCCACCGGTGCCCTTGATACCGCAACCGGCAGGGTAGTGATGGA
CCTGTTTCATACGCTTAATCAAGAACATGGGAAGACCATTGTGTTTATTACCCACAACCCCGAGCTAGCTGCCGAAACTA
CTCGGGTAGCTACTATGCGTGACGGCATGTTTGTTGACGAAGATATCTTTCACTTTCATACGACGGGGCAACAATGA

Protein sequence : 
MAEQLIKMRGIVKRFNIGQPGELQVLHGCDFDVTEGEFVSVVGTSGSGKSTLMNIVGLLDRPTAGSYLFNGVNVLESNDD
ELSRYRSKSIGFVFQNFNLIGRIDALKNVELPMMYAGVSRKERQTRAEELLELVGMADRMHHQPNELSGGQKQRVAIARA
LANDPHLLLADEPTGALDTATGRVVMDLFHTLNQEHGKTIVFITHNPELAAETTRVATMRDGMFVDEDIFHFHTTGQQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-26 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CDHC04_0390 YP_005139701.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 5e-50 53
CDHC04_0390 YP_005139701.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 6e-36 46
CDHC04_0390 YP_005139701.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 2e-34 41
CDHC04_0390 YP_005139701.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 7e-29 41